RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
SMN2-202ENST00000380742 KLHL34Q8N239 644 aa23.57■■□□□ 1.36
SMN2-202ENST00000380742 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
SMN2-202ENST00000380742 HDAC5Q9UQL6 1122 aa23.57■■□□□ 1.36
SMN2-202ENST00000380742 BRCA1P38398 1863 aaKnown RBP23.56■■□□□ 1.36
SMN2-202ENST00000380742 RABL6Q3YEC7 729 aaPredicted RBP23.56■■□□□ 1.36
SMN2-202ENST00000380742 LMBR1LQ6UX01 489 aa23.56■■□□□ 1.36
SMN2-202ENST00000380742 CCDC85AQ96PX6 553 aaPredicted RBP23.56■■□□□ 1.36
SMN2-202ENST00000380742 SPEF2Q9C093 1822 aa23.55■■□□□ 1.36
SMN2-202ENST00000380742 COL4A1P02462 1669 aa23.55■■□□□ 1.36
SMN2-202ENST00000380742 CHRNA5P30532 468 aa23.55■■□□□ 1.36
SMN2-202ENST00000380742 C2CD5Q86YS7 1000 aa23.55■■□□□ 1.36
SMN2-202ENST00000380742 FHDC1Q9C0D6 1143 aaPredicted RBP23.55■■□□□ 1.36
SMN2-202ENST00000380742 SRGNP10124 158 aa23.54■■□□□ 1.36
SMN2-202ENST00000380742 SRCAPQ6ZRS2 3230 aa23.54■■□□□ 1.36
SMN2-202ENST00000380742 H0YIN7 160 aa23.53■■□□□ 1.36
SMN2-202ENST00000380742 TGFB2P61812 414 aa23.53■■□□□ 1.36
SMN2-202ENST00000380742 GREM2Q9H772 168 aa23.53■■□□□ 1.36
SMN2-202ENST00000380742 A0A0G2JLW4 131 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 DPEP1P16444 411 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 FAM161AQ3B820 660 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 CCDC152Q4G0S7 254 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 PDZRN3Q9UPQ7 1066 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 KCNA3P22001 575 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 HOXA10P31260 410 aaPredicted RBP23.52■■□□□ 1.36
SMN2-202ENST00000380742 NLGN2Q8NFZ4 835 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 RPGRQ92834 1020 aaKnown RBP23.52■■□□□ 1.36
SMN2-202ENST00000380742 CHMP3Q9Y3E7 222 aa23.52■■□□□ 1.36
SMN2-202ENST00000380742 NPR1P16066 1061 aa23.51■■□□□ 1.35
SMN2-202ENST00000380742 MASTLQ96GX5 879 aa23.51■■□□□ 1.35
SMN2-202ENST00000380742 SEC31BQ9NQW1 1179 aa23.51■■□□□ 1.35
SMN2-202ENST00000380742 SLX4Q8IY92 1834 aa23.5■■□□□ 1.35
SMN2-202ENST00000380742 MTX1Q13505 466 aa23.5■■□□□ 1.35
SMN2-202ENST00000380742 CEP85Q6P2H3 762 aa23.5■■□□□ 1.35
SMN2-202ENST00000380742 ITGA6P23229 1130 aa23.49■■□□□ 1.35
SMN2-202ENST00000380742 STYK1Q6J9G0 422 aa23.49■■□□□ 1.35
SMN2-202ENST00000380742 DDX46Q7L014 1031 aaKnown RBP23.49■■□□□ 1.35
SMN2-202ENST00000380742 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
SMN2-202ENST00000380742 RBM17Q96I25 401 aaKnown RBP23.49■■□□□ 1.35
SMN2-202ENST00000380742 SYT17Q9BSW7 474 aa23.49■■□□□ 1.35
SMN2-202ENST00000380742 PNMA6EA0A0J9YXQ4 647 aa23.48■■□□□ 1.35
SMN2-202ENST00000380742 ATP8B2P98198 1209 aa23.48■■□□□ 1.35
SMN2-202ENST00000380742 CRAMP1Q96RY5 1269 aa23.48■■□□□ 1.35
SMN2-202ENST00000380742 PCDHB15Q9Y5E8 787 aa23.48■■□□□ 1.35
SMN2-202ENST00000380742 SRGAP3O43295 1099 aa23.47■■□□□ 1.35
SMN2-202ENST00000380742 NEFLP07196 543 aa23.47■■□□□ 1.35
SMN2-202ENST00000380742 RFX5P48382 616 aaPredicted RBP23.47■■□□□ 1.35
SMN2-202ENST00000380742 IFIT5Q13325 482 aaKnown RBP23.47■■□□□ 1.35
SMN2-202ENST00000380742 AAMPQ13685 434 aa23.47■■□□□ 1.35
SMN2-202ENST00000380742 SIRT2Q8IXJ6 389 aa23.47■■□□□ 1.35
SMN2-202ENST00000380742 CELF1Q92879 486 aaKnown RBP23.47■■□□□ 1.35
SMN2-202ENST00000380742 ANKRD18BA2A2Z9 1011 aa23.46■■□□□ 1.35
SMN2-202ENST00000380742 CCDC57Q2TAC2 916 aa23.46■■□□□ 1.35
SMN2-202ENST00000380742 RPAP2Q8IXW5 612 aaPredicted RBP23.46■■□□□ 1.35
SMN2-202ENST00000380742 ALDH1B1P30837 517 aa23.45■■□□□ 1.34
SMN2-202ENST00000380742 GRAPQ13588 217 aa23.45■■□□□ 1.34
SMN2-202ENST00000380742 GRAPLQ8TC17 118 aaPredicted RBP23.45■■□□□ 1.34
SMN2-202ENST00000380742 ZNF594Q96JF6 807 aaPredicted RBP23.45■■□□□ 1.34
SMN2-202ENST00000380742 KLHDC4Q8TBB5 520 aa23.44■■□□□ 1.34
SMN2-202ENST00000380742 SSH3Q8TE77 659 aa23.44■■□□□ 1.34
SMN2-202ENST00000380742 CNKSR1Q969H4 720 aa23.44■■□□□ 1.34
SMN2-202ENST00000380742 A0A1B0GUL6 1792 aa23.43■■□□□ 1.34
SMN2-202ENST00000380742 RPS8P62241 208 aaKnown RBP23.43■■□□□ 1.34
SMN2-202ENST00000380742 POLA2Q14181 598 aa23.43■■□□□ 1.34
SMN2-202ENST00000380742 CDC5LQ99459 802 aaKnown RBP23.43■■□□□ 1.34
SMN2-202ENST00000380742 PIM2Q9P1W9 311 aa23.43■■□□□ 1.34
SMN2-202ENST00000380742 ARFGEF1Q9Y6D6 1849 aa23.43■■□□□ 1.34
SMN2-202ENST00000380742 PTPN12Q05209 780 aaKnown RBP23.42■■□□□ 1.34
SMN2-202ENST00000380742 TTLL6Q8N841 843 aa23.42■■□□□ 1.34
SMN2-202ENST00000380742 WWC3Q9ULE0 1092 aa23.42■■□□□ 1.34
SMN2-202ENST00000380742 LRRC37AA6NMS7 1700 aa23.42■■□□□ 1.34
SMN2-202ENST00000380742 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
SMN2-202ENST00000380742 SLC51AQ86UW1 340 aa23.41■■□□□ 1.34
SMN2-202ENST00000380742 ANKRD18AQ8IVF6 992 aa23.41■■□□□ 1.34
SMN2-202ENST00000380742 PA2G4Q9UQ80 394 aaKnown RBP23.41■■□□□ 1.34
SMN2-202ENST00000380742 BBOX1O75936 387 aa23.4■■□□□ 1.34
SMN2-202ENST00000380742 TAF7LQ5H9L4 462 aa23.4■■□□□ 1.34
SMN2-202ENST00000380742 GOLGB1Q14789 3259 aaKnown RBP23.4■■□□□ 1.34
SMN2-202ENST00000380742 IGHMBP2P38935 993 aaKnown RBP23.4■■□□□ 1.34
SMN2-202ENST00000380742 COPRSQ9NQ92 184 aa23.4■■□□□ 1.34
SMN2-202ENST00000380742 PPEF1O14829 653 aaPredicted RBP23.39■■□□□ 1.33
SMN2-202ENST00000380742 DALRD3Q5D0E6 543 aaKnown RBP23.39■■□□□ 1.33
SMN2-202ENST00000380742 PUS3Q9BZE2 481 aaKnown RBP23.39■■□□□ 1.33
SMN2-202ENST00000380742 LDHAL6AQ6ZMR3 332 aa23.38■■□□□ 1.33
SMN2-202ENST00000380742 MPHOSPH8Q99549 860 aa23.38■■□□□ 1.33
SMN2-202ENST00000380742 BSDC1Q9NW68 430 aaPredicted RBP23.38■■□□□ 1.33
SMN2-202ENST00000380742 HMMRO75330 724 aa23.37■■□□□ 1.33
SMN2-202ENST00000380742 LRRC24Q50LG9 513 aa23.37■■□□□ 1.33
SMN2-202ENST00000380742 OLFM4Q6UX06 510 aa23.37■■□□□ 1.33
SMN2-202ENST00000380742 C7orf43Q8WVR3 580 aa23.37■■□□□ 1.33
SMN2-202ENST00000380742 SIL1Q9H173 461 aa23.37■■□□□ 1.33
SMN2-202ENST00000380742 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
SMN2-202ENST00000380742 BCS1LQ9Y276 419 aa23.36■■□□□ 1.33
SMN2-202ENST00000380742 ATP6V0A2Q9Y487 856 aa23.36■■□□□ 1.33
SMN2-202ENST00000380742 LTBP1Q14766 1721 aa23.35■■□□□ 1.33
SMN2-202ENST00000380742 EYA2O00167 538 aa23.35■■□□□ 1.33
SMN2-202ENST00000380742 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
SMN2-202ENST00000380742 TMC4Q7Z404 712 aa23.35■■□□□ 1.33
SMN2-202ENST00000380742 SP8Q8IXZ3 490 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms