RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CCDC192P0DO97 292 aa19.69■□□□□ 0.74
PCDHA1-201ENST00000378133 PDIA6Q15084 440 aa19.69■□□□□ 0.74
PCDHA1-201ENST00000378133 SLC39A6Q13433 755 aa19.69■□□□□ 0.74
PCDHA1-201ENST00000378133 RIC3Q7Z5B4 369 aa19.69■□□□□ 0.74
PCDHA1-201ENST00000378133 SLC27A2O14975 620 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 TCEANC2Q96MN5 208 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 NCAPD2Q15021 1401 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 UTYO14607 1347 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 A0A0D9SFI3 127 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 MYL6BP14649 208 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 FSD1Q9BTV5 496 aa19.68■□□□□ 0.74
PCDHA1-201ENST00000378133 HIP1O00291 1037 aa19.67■□□□□ 0.74
PCDHA1-201ENST00000378133 LARP1BQ659C4 914 aaKnown RBP19.67■□□□□ 0.74
PCDHA1-201ENST00000378133 PTGS1P23219 599 aa19.67■□□□□ 0.74
PCDHA1-201ENST00000378133 FEZ1Q99689 392 aa19.67■□□□□ 0.74
PCDHA1-201ENST00000378133 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
PCDHA1-201ENST00000378133 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
PCDHA1-201ENST00000378133 C1orf167Q5SNV9 1468 aa19.66■□□□□ 0.74
PCDHA1-201ENST00000378133 PSMA5P28066 241 aa19.66■□□□□ 0.74
PCDHA1-201ENST00000378133 FERMT3Q86UX7 667 aa19.66■□□□□ 0.74
PCDHA1-201ENST00000378133 IGSF3O75054 1194 aa19.65■□□□□ 0.74
PCDHA1-201ENST00000378133 PAXIP1Q6ZW49 1069 aaPredicted RBP19.65■□□□□ 0.74
PCDHA1-201ENST00000378133 EPHA10Q5JZY3 1008 aa19.65■□□□□ 0.74
PCDHA1-201ENST00000378133 FAM173BQ6P4H8 233 aa19.65■□□□□ 0.74
PCDHA1-201ENST00000378133 FAM200AQ8TCP9 573 aa19.65■□□□□ 0.74
PCDHA1-201ENST00000378133 EDC3Q96F86 508 aaKnown RBP19.65■□□□□ 0.74
PCDHA1-201ENST00000378133 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
PCDHA1-201ENST00000378133 LARP1Q6PKG0 1096 aaKnown RBP19.64■□□□□ 0.73
PCDHA1-201ENST00000378133 BLOC1S2Q6QNY1 142 aa19.64■□□□□ 0.73
PCDHA1-201ENST00000378133 IPO4Q8TEX9 1081 aaKnown RBP19.64■□□□□ 0.73
PCDHA1-201ENST00000378133 CDC37L1Q7L3B6 337 aa19.64■□□□□ 0.73
PCDHA1-201ENST00000378133 ZNF589Q86UQ0 364 aaPredicted RBP19.64■□□□□ 0.73
PCDHA1-201ENST00000378133 CHMP3Q9Y3E7 222 aa19.64■□□□□ 0.73
PCDHA1-201ENST00000378133 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 OVOS2A0A0G2JMS6 1433 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 PHRF1Q9P1Y6 1649 aaKnown RBP19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 NEURL1BA8MQ27 555 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 NEXNQ0ZGT2 675 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 COPS6Q7L5N1 327 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 TMEM51Q9NW97 253 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 OGFRQ9NZT2 677 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 MST1RQ04912 1400 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 NCBP1Q09161 790 aaKnown RBP19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 RNF20Q5VTR2 975 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 CCDC186Q7Z3E2 898 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 XAGE3Q8WTP9 111 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 MYD88Q99836 296 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 SNRKQ9NRH2 765 aa19.63■□□□□ 0.73
PCDHA1-201ENST00000378133 ZC3H6P61129 1189 aaKnown RBP19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 GCKRQ14397 625 aa19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 TTC6Q86TZ1 520 aa19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 LUZP1Q86V48 1076 aa19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 NFATC2IPQ8NCF5 419 aa19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 C16orf45Q96MC5 204 aaPredicted RBP19.62■□□□□ 0.73
PCDHA1-201ENST00000378133 RPS6KB1P23443 525 aa19.61■□□□□ 0.73
PCDHA1-201ENST00000378133 CAMK4Q16566 473 aa19.61■□□□□ 0.73
PCDHA1-201ENST00000378133 PIP4K2AP48426 406 aaPredicted RBP19.61■□□□□ 0.73
PCDHA1-201ENST00000378133 KRT85P78386 507 aa19.61■□□□□ 0.73
PCDHA1-201ENST00000378133 STK3Q13188 491 aa19.61■□□□□ 0.73
PCDHA1-201ENST00000378133 DCCP43146 1447 aa19.61■□□□□ 0.73
PCDHA1-201ENST00000378133 VGLL3A8MV65 326 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 ATF3P18847 181 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 TYRO3Q06418 890 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 TOB2Q14106 344 aaPredicted RBP19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 NUP62CLQ9H1M0 184 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 MRVI1Q9Y6F6 885 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 SMTNL1A8MU46 457 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 LRMPQ12912 555 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 ANKRD1Q15327 319 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 NDUFB9Q9Y6M9 179 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 KIF1AQ12756 1690 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 MED23Q9ULK4 1368 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 SYCP1Q15431 976 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 METTL22Q9BUU2 404 aaPredicted RBP19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 SLC52A2Q9HAB3 445 aa19.6■□□□□ 0.73
PCDHA1-201ENST00000378133 TNNT1P13805 278 aa19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 PDCP20941 246 aa19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 ZNF771Q7L3S4 317 aaPredicted RBP19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 TAF5LO75529 589 aa19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 PLCD3Q8N3E9 789 aa19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 TFIP11Q9UBB9 837 aaKnown RBP19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 NRBP1Q9UHY1 535 aa19.59■□□□□ 0.73
PCDHA1-201ENST00000378133 TRPM3Q9HCF6 1732 aaPredicted RBP19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 LIG1P18858 919 aa19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 ANKRD13DQ6ZTN6 518 aa19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 CTNNA3Q9UI47 895 aa19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 DBNLQ9UJU6 430 aaKnown RBP19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 USP16Q9Y5T5 823 aa19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 ERBB3P21860 1342 aa19.58■□□□□ 0.73
PCDHA1-201ENST00000378133 SIPA1L3O60292 1781 aaPredicted RBP19.58■□□□□ 0.72
PCDHA1-201ENST00000378133 CHGBP05060 677 aa19.58■□□□□ 0.72
PCDHA1-201ENST00000378133 TRIM5Q9C035 493 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms