RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SYAP1Q96A49 352 aaPredicted RBP18.31■□□□□ 0.52
FXN-201ENST00000377270 BORCS6Q96GS4 357 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 CHAMP1Q96JM3 812 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 ST18O60284 1047 aa18.3■□□□□ 0.52
FXN-201ENST00000377270 ATP2B1P20020 1258 aa18.3■□□□□ 0.52
FXN-201ENST00000377270 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
FXN-201ENST00000377270 CCDC91Q7Z6B0 441 aa18.3■□□□□ 0.52
FXN-201ENST00000377270 SRGAP3O43295 1099 aa18.29■□□□□ 0.52
FXN-201ENST00000377270 FAM184AQ8NB25 1140 aa18.29■□□□□ 0.52
FXN-201ENST00000377270 STAP2Q9UGK3 403 aa18.29■□□□□ 0.52
FXN-201ENST00000377270 NCAPD2Q15021 1401 aa18.29■□□□□ 0.52
FXN-201ENST00000377270 N4BP2Q86UW6 1770 aaPredicted RBP18.29■□□□□ 0.52
FXN-201ENST00000377270 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
FXN-201ENST00000377270 BIRC2Q13490 618 aa18.29■□□□□ 0.52
FXN-201ENST00000377270 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
FXN-201ENST00000377270 POLA2Q14181 598 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 E2F4Q16254 413 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 GOLGA6L1Q8N7Z2 621 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 PSMD1Q99460 953 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 DEF6Q9H4E7 631 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 RAB11FIP3O75154 756 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 NEK11Q8NG66 645 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
FXN-201ENST00000377270 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.52
FXN-201ENST00000377270 PRAMEF22A3QJZ6 481 aa18.27■□□□□ 0.52
FXN-201ENST00000377270 ATF3P18847 181 aa18.27■□□□□ 0.52
FXN-201ENST00000377270 GSCP56915 257 aaPredicted RBP18.27■□□□□ 0.52
FXN-201ENST00000377270 DDX17Q92841 729 aaKnown RBP18.27■□□□□ 0.52
FXN-201ENST00000377270 PRDM16Q9HAZ2 1276 aa18.27■□□□□ 0.52
FXN-201ENST00000377270 RBM28Q9NW13 759 aaKnown RBP18.27■□□□□ 0.52
FXN-201ENST00000377270 ADCY9O60503 1353 aa18.27■□□□□ 0.52
FXN-201ENST00000377270 KRBA2Q6ZNG9 492 aa18.27■□□□□ 0.51
FXN-201ENST00000377270 ERBB3P21860 1342 aa18.27■□□□□ 0.51
FXN-201ENST00000377270 A0A1B0GUL7 405 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 CHMLP26374 656 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 SSR1P43307 286 aaKnown RBP18.26■□□□□ 0.51
FXN-201ENST00000377270 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 NLRP2Q9NX02 1062 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 USP25Q9UHP3 1055 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
FXN-201ENST00000377270 PPP2R5AQ15172 486 aa18.25■□□□□ 0.51
FXN-201ENST00000377270 PPP1R12AO14974 1030 aaPredicted RBP18.25■□□□□ 0.51
FXN-201ENST00000377270 ADCY5O95622 1261 aa18.25■□□□□ 0.51
FXN-201ENST00000377270 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
FXN-201ENST00000377270 KMT5BQ4FZB7 885 aa18.25■□□□□ 0.51
FXN-201ENST00000377270 RAPGEF4Q8WZA2 1011 aa18.25■□□□□ 0.51
FXN-201ENST00000377270 OVOS2A0A0G2JMS6 1433 aa18.24■□□□□ 0.51
FXN-201ENST00000377270 TTC31Q49AM3 519 aaPredicted RBP18.24■□□□□ 0.51
FXN-201ENST00000377270 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
FXN-201ENST00000377270 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
FXN-201ENST00000377270 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
FXN-201ENST00000377270 CCDC191Q8NCU4 936 aa18.24■□□□□ 0.51
FXN-201ENST00000377270 ZNF397Q8NF99 534 aaPredicted RBP18.24■□□□□ 0.51
FXN-201ENST00000377270 KIF1BPQ96EK5 621 aa18.24■□□□□ 0.51
FXN-201ENST00000377270 C9orf78Q9NZ63 289 aaPredicted RBP18.24■□□□□ 0.51
FXN-201ENST00000377270 HEG1Q9ULI3 1381 aa18.24■□□□□ 0.51
FXN-201ENST00000377270 KIF1AQ12756 1690 aa18.23■□□□□ 0.51
FXN-201ENST00000377270 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
FXN-201ENST00000377270 PACS2Q86VP3 889 aa18.23■□□□□ 0.51
FXN-201ENST00000377270 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
FXN-201ENST00000377270 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
FXN-201ENST00000377270 AOX1Q06278 1338 aa18.23■□□□□ 0.51
FXN-201ENST00000377270 RGPD5Q99666 1765 aa18.23■□□□□ 0.51
FXN-201ENST00000377270 TXLNBQ8N3L3 684 aa18.22■□□□□ 0.51
FXN-201ENST00000377270 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
FXN-201ENST00000377270 MAP4K4O95819 1239 aaPredicted RBP18.22■□□□□ 0.51
FXN-201ENST00000377270 ARID4AP29374 1257 aaPredicted RBP18.22■□□□□ 0.51
FXN-201ENST00000377270 KIAA1524Q8TCG1 905 aa18.22■□□□□ 0.51
FXN-201ENST00000377270 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
FXN-201ENST00000377270 BRD1O95696 1058 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 CWF19L2Q2TBE0 894 aaKnown RBP18.21■□□□□ 0.51
FXN-201ENST00000377270 OTUD6BQ8N6M0 293 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 CABLES1Q8TDN4 633 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 ALDH1L1O75891 902 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 ATP6V1AP38606 617 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 NEK4P51957 841 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
FXN-201ENST00000377270 SLC39A6Q13433 755 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 ZKSCAN8Q15776 578 aaPredicted RBP18.21■□□□□ 0.51
FXN-201ENST00000377270 HSP90AB4PQ58FF6 505 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 RPAINQ86UA6 219 aa18.21■□□□□ 0.51
FXN-201ENST00000377270 CSB-PGBD3P0DP91 1061 aa18.2■□□□□ 0.5
FXN-201ENST00000377270 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
FXN-201ENST00000377270 ANAPC15P60006 121 aa18.2■□□□□ 0.5
FXN-201ENST00000377270 BMS1Q14692 1282 aaKnown RBP18.2■□□□□ 0.5
FXN-201ENST00000377270 SRLQ86TD4 932 aa18.2■□□□□ 0.5
FXN-201ENST00000377270 ZNF513Q8N8E2 541 aaPredicted RBP18.2■□□□□ 0.5
FXN-201ENST00000377270 TUBGCP6Q96RT7 1819 aa18.2■□□□□ 0.5
FXN-201ENST00000377270 CAMTA1Q9Y6Y1 1673 aa18.2■□□□□ 0.5
FXN-201ENST00000377270 MST1RQ04912 1400 aa18.2■□□□□ 0.5
FXN-201ENST00000377270 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
FXN-201ENST00000377270 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
FXN-201ENST00000377270 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
FXN-201ENST00000377270 PALD1Q9ULE6 856 aa18.19■□□□□ 0.5
FXN-201ENST00000377270 PYCARDQ9ULZ3 195 aa18.19■□□□□ 0.5
FXN-201ENST00000377270 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
FXN-201ENST00000377270 RRP15Q9Y3B9 282 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms