RNA–Protein interactions for RNA: ENST00000372898.6

SWI5-202, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS ALT2 TSL 5

Gene SWI5, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-202ENST00000372898 EXOC6Q8TAG9 804 aa18.27■□□□□ 0.52
SWI5-202ENST00000372898 RPGRQ92834 1020 aaKnown RBP18.27■□□□□ 0.52
SWI5-202ENST00000372898 KAZALD1Q96I82 304 aa18.27■□□□□ 0.52
SWI5-202ENST00000372898 C1orf115Q9H7X2 142 aa18.27■□□□□ 0.52
SWI5-202ENST00000372898 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
SWI5-202ENST00000372898 BRCA1P38398 1863 aaKnown RBP18.26■□□□□ 0.51
SWI5-202ENST00000372898 KLRG2A4D1S0 409 aaPredicted RBP18.26■□□□□ 0.51
SWI5-202ENST00000372898 H0YIN7 160 aa18.26■□□□□ 0.51
SWI5-202ENST00000372898 SF3B3Q15393 1217 aaKnown RBP18.26■□□□□ 0.51
SWI5-202ENST00000372898 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
SWI5-202ENST00000372898 TTLL11Q8NHH1 800 aa18.26■□□□□ 0.51
SWI5-202ENST00000372898 RABL6Q3YEC7 729 aaPredicted RBP18.25■□□□□ 0.51
SWI5-202ENST00000372898 CRY2Q49AN0 593 aa18.25■□□□□ 0.51
SWI5-202ENST00000372898 ANKRD44Q8N8A2 993 aa18.25■□□□□ 0.51
SWI5-202ENST00000372898 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
SWI5-202ENST00000372898 CSF1RP07333 972 aa18.24■□□□□ 0.51
SWI5-202ENST00000372898 NPR1P16066 1061 aa18.24■□□□□ 0.51
SWI5-202ENST00000372898 CHRNA5P30532 468 aa18.24■□□□□ 0.51
SWI5-202ENST00000372898 TGFB2P61812 414 aa18.24■□□□□ 0.51
SWI5-202ENST00000372898 AAMPQ13685 434 aa18.24■□□□□ 0.51
SWI5-202ENST00000372898 FHDC1Q9C0D6 1143 aaPredicted RBP18.24■□□□□ 0.51
SWI5-202ENST00000372898 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
SWI5-202ENST00000372898 SRGNP10124 158 aa18.23■□□□□ 0.51
SWI5-202ENST00000372898 FAM161AQ3B820 660 aa18.23■□□□□ 0.51
SWI5-202ENST00000372898 DDX46Q7L014 1031 aaKnown RBP18.23■□□□□ 0.51
SWI5-202ENST00000372898 MASTLQ96GX5 879 aa18.23■□□□□ 0.51
SWI5-202ENST00000372898 RBM17Q96I25 401 aaKnown RBP18.23■□□□□ 0.51
SWI5-202ENST00000372898 GREM2Q9H772 168 aa18.23■□□□□ 0.51
SWI5-202ENST00000372898 SLX4Q8IY92 1834 aa18.22■□□□□ 0.51
SWI5-202ENST00000372898 A0A0G2JLW4 131 aa18.22■□□□□ 0.51
SWI5-202ENST00000372898 DPEP1P16444 411 aa18.22■□□□□ 0.51
SWI5-202ENST00000372898 ZNF622Q969S3 477 aaKnown RBP eCLIP18.22■□□□□ 0.511e-7■■□□□ 14.3
SWI5-202ENST00000372898 ANKRD18BA2A2Z9 1011 aa18.21■□□□□ 0.51
SWI5-202ENST00000372898 ITGA6P23229 1130 aa18.21■□□□□ 0.51
SWI5-202ENST00000372898 HOXA10P31260 410 aaPredicted RBP18.21■□□□□ 0.51
SWI5-202ENST00000372898 IFIT5Q13325 482 aaKnown RBP18.21■□□□□ 0.51
SWI5-202ENST00000372898 MTX1Q13505 466 aa18.21■□□□□ 0.51
SWI5-202ENST00000372898 CCDC57Q2TAC2 916 aa18.21■□□□□ 0.51
SWI5-202ENST00000372898 STYK1Q6J9G0 422 aa18.21■□□□□ 0.51
SWI5-202ENST00000372898 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
SWI5-202ENST00000372898 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
SWI5-202ENST00000372898 CEP85Q6P2H3 762 aa18.2■□□□□ 0.5
SWI5-202ENST00000372898 NLGN2Q8NFZ4 835 aa18.2■□□□□ 0.5
SWI5-202ENST00000372898 CRAMP1Q96RY5 1269 aa18.2■□□□□ 0.5
SWI5-202ENST00000372898 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
SWI5-202ENST00000372898 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
SWI5-202ENST00000372898 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
SWI5-202ENST00000372898 ALDH1B1P30837 517 aa18.19■□□□□ 0.5
SWI5-202ENST00000372898 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
SWI5-202ENST00000372898 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
SWI5-202ENST00000372898 CNKSR1Q969H4 720 aa18.19■□□□□ 0.5
SWI5-202ENST00000372898 SYT17Q9BSW7 474 aa18.19■□□□□ 0.5
SWI5-202ENST00000372898 COL4A1P02462 1669 aa18.18■□□□□ 0.5
SWI5-202ENST00000372898 GRAPQ13588 217 aa18.18■□□□□ 0.5
SWI5-202ENST00000372898 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
SWI5-202ENST00000372898 PIM2Q9P1W9 311 aa18.18■□□□□ 0.5
SWI5-202ENST00000372898 A0A1B0GUL6 1792 aa18.17■□□□□ 0.5
SWI5-202ENST00000372898 PNMA6EA0A0J9YXQ4 647 aa18.17■□□□□ 0.5
SWI5-202ENST00000372898 HMMRO75330 724 aa18.17■□□□□ 0.5
SWI5-202ENST00000372898 KCNA3P22001 575 aa18.17■□□□□ 0.5
SWI5-202ENST00000372898 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
SWI5-202ENST00000372898 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
SWI5-202ENST00000372898 LRRC37AA6NMS7 1700 aa18.16■□□□□ 0.5
SWI5-202ENST00000372898 IGHMBP2P38935 993 aaKnown RBP18.16■□□□□ 0.5
SWI5-202ENST00000372898 RPS8P62241 208 aaKnown RBP18.16■□□□□ 0.5
SWI5-202ENST00000372898 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
SWI5-202ENST00000372898 SSH3Q8TE77 659 aa18.16■□□□□ 0.5
SWI5-202ENST00000372898 ZNF594Q96JF6 807 aaPredicted RBP18.16■□□□□ 0.5
SWI5-202ENST00000372898 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
SWI5-202ENST00000372898 BBOX1O75936 387 aa18.15■□□□□ 0.5
SWI5-202ENST00000372898 RFX5P48382 616 aaPredicted RBP18.15■□□□□ 0.5
SWI5-202ENST00000372898 POLA2Q14181 598 aa18.15■□□□□ 0.5
SWI5-202ENST00000372898 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
SWI5-202ENST00000372898 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
SWI5-202ENST00000372898 PPEF1O14829 653 aaPredicted RBP18.14■□□□□ 0.49
SWI5-202ENST00000372898 DALRD3Q5D0E6 543 aaKnown RBP18.14■□□□□ 0.49
SWI5-202ENST00000372898 TMC4Q7Z404 712 aa18.14■□□□□ 0.49
SWI5-202ENST00000372898 SIRT2Q8IXJ6 389 aa18.14■□□□□ 0.49
SWI5-202ENST00000372898 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.49
SWI5-202ENST00000372898 WWC3Q9ULE0 1092 aa18.14■□□□□ 0.49
SWI5-202ENST00000372898 PTPN12Q05209 780 aaKnown RBP18.13■□□□□ 0.49
SWI5-202ENST00000372898 LDHAL6AQ6ZMR3 332 aa18.13■□□□□ 0.49
SWI5-202ENST00000372898 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
SWI5-202ENST00000372898 CNNM1Q9NRU3 951 aa18.13■□□□□ 0.49
SWI5-202ENST00000372898 PA2G4Q9UQ80 394 aaKnown RBP18.13■□□□□ 0.49
SWI5-202ENST00000372898 SIL1Q9H173 461 aa18.12■□□□□ 0.49
SWI5-202ENST00000372898 TMX4Q9H1E5 349 aaPredicted RBP18.12■□□□□ 0.49
SWI5-202ENST00000372898 BSDC1Q9NW68 430 aaPredicted RBP18.12■□□□□ 0.49
SWI5-202ENST00000372898 BCS1LQ9Y276 419 aa18.12■□□□□ 0.49
SWI5-202ENST00000372898 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
SWI5-202ENST00000372898 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
SWI5-202ENST00000372898 FER1L6Q2WGJ9 1857 aa18.1■□□□□ 0.49
SWI5-202ENST00000372898 EYA2O00167 538 aa18.1■□□□□ 0.49
SWI5-202ENST00000372898 SURF6O75683 361 aaKnown RBP18.1■□□□□ 0.49
SWI5-202ENST00000372898 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.49
SWI5-202ENST00000372898 OS9Q13438 667 aaPredicted RBP18.1■□□□□ 0.49
SWI5-202ENST00000372898 ERICH6BQ5W0A0 696 aa18.1■□□□□ 0.49
SWI5-202ENST00000372898 SP8Q8IXZ3 490 aa18.1■□□□□ 0.49
SWI5-202ENST00000372898 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
SWI5-202ENST00000372898 ATP6V0A2Q9Y487 856 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms