RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-202ENST00000371820 IPO9Q96P70 1041 aaKnown RBP13.15□□□□□ -0.3
COL5A1-202ENST00000371820 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
COL5A1-202ENST00000371820 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
COL5A1-202ENST00000371820 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
COL5A1-202ENST00000371820 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
COL5A1-202ENST00000371820 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
COL5A1-202ENST00000371820 EPHX2P34913 555 aa13.14□□□□□ -0.31
COL5A1-202ENST00000371820 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
COL5A1-202ENST00000371820 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
COL5A1-202ENST00000371820 GPC2Q8N158 579 aa13.14□□□□□ -0.31
COL5A1-202ENST00000371820 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
COL5A1-202ENST00000371820 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
COL5A1-202ENST00000371820 NOP58Q9Y2X3 529 aaKnown RBP13.14□□□□□ -0.31
COL5A1-202ENST00000371820 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
COL5A1-202ENST00000371820 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-202ENST00000371820 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
COL5A1-202ENST00000371820 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
COL5A1-202ENST00000371820 SLC51AQ86UW1 340 aa13.13□□□□□ -0.31
COL5A1-202ENST00000371820 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
COL5A1-202ENST00000371820 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
COL5A1-202ENST00000371820 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
COL5A1-202ENST00000371820 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-202ENST00000371820 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
COL5A1-202ENST00000371820 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-202ENST00000371820 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
COL5A1-202ENST00000371820 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
COL5A1-202ENST00000371820 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
COL5A1-202ENST00000371820 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
COL5A1-202ENST00000371820 LAMB2P55268 1798 aa13.12□□□□□ -0.31
COL5A1-202ENST00000371820 EIF6P56537 245 aaKnown RBP13.11□□□□□ -0.31
COL5A1-202ENST00000371820 AAMPQ13685 434 aa13.11□□□□□ -0.31
COL5A1-202ENST00000371820 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
COL5A1-202ENST00000371820 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 ATP5J2-PTCD1G3V325 749 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 BBOX1O75936 387 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 LARGE2Q8N3Y3 721 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 PHAXQ9H814 394 aaKnown RBP13.1□□□□□ -0.31
COL5A1-202ENST00000371820 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
COL5A1-202ENST00000371820 ABCC4O15439 1325 aa13.1□□□□□ -0.31
COL5A1-202ENST00000371820 HCLS1P14317 486 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-202ENST00000371820 SCNN1DP51172 638 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 NEXNQ0ZGT2 675 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 MAP1SQ66K74 1059 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-202ENST00000371820 CNTROBQ8N137 903 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
COL5A1-202ENST00000371820 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 GJA3Q9Y6H8 435 aa13.09□□□□□ -0.31
COL5A1-202ENST00000371820 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
COL5A1-202ENST00000371820 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-202ENST00000371820 GRAPQ13588 217 aa13.08□□□□□ -0.32
COL5A1-202ENST00000371820 NIM1KQ8IY84 436 aa13.08□□□□□ -0.32
COL5A1-202ENST00000371820 ZBTB38Q8NAP3 1195 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-202ENST00000371820 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-202ENST00000371820 FAM89AQ96GI7 184 aa13.08□□□□□ -0.32
COL5A1-202ENST00000371820 MYD88Q99836 296 aa13.08□□□□□ -0.32
COL5A1-202ENST00000371820 VPS33BQ9H267 617 aa13.08□□□□□ -0.32
COL5A1-202ENST00000371820 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
COL5A1-202ENST00000371820 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-202ENST00000371820 PPIP5K2O43314 1243 aa13.07□□□□□ -0.32
COL5A1-202ENST00000371820 VEGFBP49765 207 aa13.07□□□□□ -0.32
COL5A1-202ENST00000371820 SF3B3Q15393 1217 aaKnown RBP13.07□□□□□ -0.32
COL5A1-202ENST00000371820 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
COL5A1-202ENST00000371820 SP8Q8IXZ3 490 aa13.07□□□□□ -0.32
COL5A1-202ENST00000371820 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
COL5A1-202ENST00000371820 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
COL5A1-202ENST00000371820 MAP3K2Q9Y2U5 619 aa13.07□□□□□ -0.32
COL5A1-202ENST00000371820 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
COL5A1-202ENST00000371820 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 FOXN1O15353 648 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 CAPN15O75808 1086 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 SLC4A2P04920 1241 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 PCCAP05165 728 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-202ENST00000371820 EPS15P42566 896 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 AOC3Q16853 763 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
COL5A1-202ENST00000371820 CACNA1FO60840 1977 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 DUOX1Q9NRD9 1551 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
COL5A1-202ENST00000371820 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
COL5A1-202ENST00000371820 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
COL5A1-202ENST00000371820 DPP8Q6V1X1 898 aaPredicted RBP13.05□□□□□ -0.32
COL5A1-202ENST00000371820 MPNDQ8N594 471 aa13.05□□□□□ -0.32
COL5A1-202ENST00000371820 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
COL5A1-202ENST00000371820 E9PSI1 815 aa13.04□□□□□ -0.32
COL5A1-202ENST00000371820 PDE8AO60658 829 aa13.04□□□□□ -0.32
COL5A1-202ENST00000371820 VAMP4O75379 141 aa13.04□□□□□ -0.32
COL5A1-202ENST00000371820 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-202ENST00000371820 CCDC152Q4G0S7 254 aa13.04□□□□□ -0.32
COL5A1-202ENST00000371820 RTL5Q5HYW3 569 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-202ENST00000371820 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
COL5A1-202ENST00000371820 GPRC5DQ9NZD1 345 aa13.04□□□□□ -0.32
COL5A1-202ENST00000371820 ZNRF3Q9ULT6 936 aa13.04□□□□□ -0.32
COL5A1-202ENST00000371820 CDHR2Q9BYE9 1310 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms