RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 BRIP1Q9BX63 1249 aa19.67■□□□□ 0.74
FDPS-202ENST00000368356 PDE6BP35913 854 aa19.66■□□□□ 0.74
FDPS-202ENST00000368356 HDAC1Q13547 482 aaPredicted RBP19.66■□□□□ 0.74
FDPS-202ENST00000368356 RABL6Q3YEC7 729 aaPredicted RBP19.66■□□□□ 0.74
FDPS-202ENST00000368356 RTL5Q5HYW3 569 aaPredicted RBP19.66■□□□□ 0.74
FDPS-202ENST00000368356 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
FDPS-202ENST00000368356 PIM2Q9P1W9 311 aa19.66■□□□□ 0.74
FDPS-202ENST00000368356 COL11A2P13942 1736 aaPredicted RBP19.65■□□□□ 0.74
FDPS-202ENST00000368356 CHRNA5P30532 468 aa19.65■□□□□ 0.74
FDPS-202ENST00000368356 FOXO4P98177 505 aa19.65■□□□□ 0.74
FDPS-202ENST00000368356 EPHA10Q5JZY3 1008 aa19.65■□□□□ 0.74
FDPS-202ENST00000368356 SYNE4Q8N205 404 aa19.65■□□□□ 0.74
FDPS-202ENST00000368356 BICC1Q9H694 974 aaKnown RBP19.65■□□□□ 0.74
FDPS-202ENST00000368356 WWC3Q9ULE0 1092 aa19.65■□□□□ 0.74
FDPS-202ENST00000368356 GOLGB1Q14789 3259 aaKnown RBP19.64■□□□□ 0.73
FDPS-202ENST00000368356 FAM177BA6PVY3 158 aa19.64■□□□□ 0.73
FDPS-202ENST00000368356 H0YIN7 160 aa19.64■□□□□ 0.73
FDPS-202ENST00000368356 IRS4O14654 1257 aaPredicted RBP19.64■□□□□ 0.73
FDPS-202ENST00000368356 HSP90B1P14625 803 aaKnown RBP19.64■□□□□ 0.73
FDPS-202ENST00000368356 KCNA3P22001 575 aa19.64■□□□□ 0.73
FDPS-202ENST00000368356 SLC10A5Q5PT55 438 aa19.64■□□□□ 0.73
FDPS-202ENST00000368356 RWDD1Q9H446 243 aaPredicted RBP19.64■□□□□ 0.73
FDPS-202ENST00000368356 PDE8AO60658 829 aa19.63■□□□□ 0.73
FDPS-202ENST00000368356 GTF2E1P29083 439 aaPredicted RBP19.63■□□□□ 0.73
FDPS-202ENST00000368356 B4GALNT3Q6L9W6 998 aa19.63■□□□□ 0.73
FDPS-202ENST00000368356 C2CD5Q86YS7 1000 aa19.63■□□□□ 0.73
FDPS-202ENST00000368356 BCS1LQ9Y276 419 aa19.63■□□□□ 0.73
FDPS-202ENST00000368356 IGHDP01880 384 aa19.62■□□□□ 0.73
FDPS-202ENST00000368356 CSF1RP07333 972 aa19.62■□□□□ 0.73
FDPS-202ENST00000368356 RIC1Q4ADV7 1423 aa19.62■□□□□ 0.73
FDPS-202ENST00000368356 NUTM1Q86Y26 1132 aa19.62■□□□□ 0.73
FDPS-202ENST00000368356 CCDC24Q8N4L8 307 aa19.62■□□□□ 0.73
FDPS-202ENST00000368356 SSH3Q8TE77 659 aa19.62■□□□□ 0.73
FDPS-202ENST00000368356 PNMA6EA0A0J9YXQ4 647 aa19.61■□□□□ 0.73
FDPS-202ENST00000368356 HMMRO75330 724 aa19.61■□□□□ 0.73
FDPS-202ENST00000368356 POLA2Q14181 598 aa19.61■□□□□ 0.73
FDPS-202ENST00000368356 ERFEQ4G0M1 354 aa19.61■□□□□ 0.73
FDPS-202ENST00000368356 DALRD3Q5D0E6 543 aaKnown RBP19.61■□□□□ 0.73
FDPS-202ENST00000368356 UTRNP46939 3433 aa19.61■□□□□ 0.73
FDPS-202ENST00000368356 LMBR1LQ6UX01 489 aa19.6■□□□□ 0.73
FDPS-202ENST00000368356 TNRC6CQ9HCJ0 1690 aaKnown RBP19.6■□□□□ 0.73
FDPS-202ENST00000368356 KDM2BQ8NHM5 1336 aa19.6■□□□□ 0.73
FDPS-202ENST00000368356 SRGAP3O43295 1099 aa19.59■□□□□ 0.73
FDPS-202ENST00000368356 CACNA1SQ13698 1873 aa19.59■□□□□ 0.73
FDPS-202ENST00000368356 ABCC12Q96J65 1359 aa19.59■□□□□ 0.73
FDPS-202ENST00000368356 HCLS1P14317 486 aaPredicted RBP19.59■□□□□ 0.73
FDPS-202ENST00000368356 CTSWP56202 376 aa19.59■□□□□ 0.73
FDPS-202ENST00000368356 TTLL11Q8NHH1 800 aa19.59■□□□□ 0.73
FDPS-202ENST00000368356 CENPQQ7L2Z9 268 aaPredicted RBP19.58■□□□□ 0.72
FDPS-202ENST00000368356 TTLL6Q8N841 843 aa19.58■□□□□ 0.72
FDPS-202ENST00000368356 DCTPP1Q9H773 170 aa19.58■□□□□ 0.72
FDPS-202ENST00000368356 KLRG2A4D1S0 409 aaPredicted RBP19.57■□□□□ 0.72
FDPS-202ENST00000368356 SRGNP10124 158 aa19.57■□□□□ 0.72
FDPS-202ENST00000368356 YY1P25490 414 aa19.57■□□□□ 0.72
FDPS-202ENST00000368356 SF3B3Q15393 1217 aaKnown RBP19.57■□□□□ 0.72
FDPS-202ENST00000368356 STYK1Q6J9G0 422 aa19.57■□□□□ 0.72
FDPS-202ENST00000368356 SMC5Q8IY18 1101 aa19.57■□□□□ 0.72
FDPS-202ENST00000368356 ZNF622Q969S3 477 aaKnown RBP eCLIP19.57■□□□□ 0.727e-15■□□□□ 9.1
FDPS-202ENST00000368356 MASTLQ96GX5 879 aa19.57■□□□□ 0.72
FDPS-202ENST00000368356 RFX5P48382 616 aaPredicted RBP19.56■□□□□ 0.72
FDPS-202ENST00000368356 CNKSR1Q969H4 720 aa19.56■□□□□ 0.72
FDPS-202ENST00000368356 GCC1Q96CN9 775 aa19.56■□□□□ 0.72
FDPS-202ENST00000368356 NLRP3Q96P20 1036 aa19.56■□□□□ 0.72
FDPS-202ENST00000368356 RTL9Q8NET4 1388 aa19.56■□□□□ 0.72
FDPS-202ENST00000368356 NPR1P16066 1061 aa19.55■□□□□ 0.72
FDPS-202ENST00000368356 CCDC152Q4G0S7 254 aa19.54■□□□□ 0.72
FDPS-202ENST00000368356 COPRSQ9NQ92 184 aa19.54■□□□□ 0.72
FDPS-202ENST00000368356 NOP58Q9Y2X3 529 aaKnown RBP19.54■□□□□ 0.72
FDPS-202ENST00000368356 PTPN12Q05209 780 aaKnown RBP19.53■□□□□ 0.72
FDPS-202ENST00000368356 CCDC57Q2TAC2 916 aa19.53■□□□□ 0.72
FDPS-202ENST00000368356 CRY2Q49AN0 593 aa19.53■□□□□ 0.72
FDPS-202ENST00000368356 GREM2Q9H772 168 aa19.53■□□□□ 0.72
FDPS-202ENST00000368356 CHMP3Q9Y3E7 222 aa19.53■□□□□ 0.72
FDPS-202ENST00000368356 TAF1P21675 1872 aa19.53■□□□□ 0.72
FDPS-202ENST00000368356 IFIT5Q13325 482 aaKnown RBP19.52■□□□□ 0.72
FDPS-202ENST00000368356 FAM161AQ3B820 660 aa19.52■□□□□ 0.72
FDPS-202ENST00000368356 SLX4Q8IY92 1834 aa19.52■□□□□ 0.72
FDPS-202ENST00000368356 ITGA6P23229 1130 aa19.51■□□□□ 0.71
FDPS-202ENST00000368356 ARHGAP27Q6ZUM4 889 aa19.51■□□□□ 0.71
FDPS-202ENST00000368356 C3orf67Q6ZVT6 689 aa19.51■□□□□ 0.71
FDPS-202ENST00000368356 ANKRD18BA2A2Z9 1011 aa19.51■□□□□ 0.71
FDPS-202ENST00000368356 SURF6O75683 361 aaKnown RBP19.51■□□□□ 0.71
FDPS-202ENST00000368356 ALDH1B1P30837 517 aa19.51■□□□□ 0.71
FDPS-202ENST00000368356 HSP90AB4PQ58FF6 505 aa19.51■□□□□ 0.71
FDPS-202ENST00000368356 RPGRQ92834 1020 aaKnown RBP19.51■□□□□ 0.71
FDPS-202ENST00000368356 CCDC85AQ96PX6 553 aaPredicted RBP19.51■□□□□ 0.71
FDPS-202ENST00000368356 FBXO3Q9UK99 471 aa19.51■□□□□ 0.71
FDPS-202ENST00000368356 PRPF40BQ6NWY9 871 aaKnown RBP19.5■□□□□ 0.71
FDPS-202ENST00000368356 PA2G4Q9UQ80 394 aaKnown RBP19.5■□□□□ 0.71
FDPS-202ENST00000368356 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
FDPS-202ENST00000368356 SPEF2Q9C093 1822 aa19.49■□□□□ 0.71
FDPS-202ENST00000368356 FER1L6Q2WGJ9 1857 aa19.49■□□□□ 0.71
FDPS-202ENST00000368356 RAB11FIP3O75154 756 aa19.49■□□□□ 0.71
FDPS-202ENST00000368356 SOGA3Q5TF21 947 aa19.49■□□□□ 0.71
FDPS-202ENST00000368356 KLHDC4Q8TBB5 520 aa19.49■□□□□ 0.71
FDPS-202ENST00000368356 SEC31BQ9NQW1 1179 aa19.48■□□□□ 0.71
FDPS-202ENST00000368356 SBF1O95248 1867 aa19.48■□□□□ 0.71
FDPS-202ENST00000368356 C21orf2O43822 256 aa19.47■□□□□ 0.71
FDPS-202ENST00000368356 CIAO1O76071 339 aa19.47■□□□□ 0.71
FDPS-202ENST00000368356 HOXA10P31260 410 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms