RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 MCM5P33992 734 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 RGS22Q8NE09 1264 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 TTC16Q8NEE8 873 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 CYP7A1P22680 504 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 TMTC2Q8N394 836 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 TMX1Q9H3N1 280 aa17.96■□□□□ 0.47
NUCKS1-201ENST00000367142 F8W031 263 aaPredicted RBP17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 PICALMQ13492 652 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 ESR2Q92731 530 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 NYXQ9GZU5 481 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 PLS1Q14651 629 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 NBPF14Q5TI25 921 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 RARSP54136 660 aaKnown RBP17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 TAF12Q16514 161 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 CEP112Q8N8E3 955 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 SLC4A4Q9Y6R1 1079 aa17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
NUCKS1-201ENST00000367142 BIN1O00499 593 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 PRPHP41219 470 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 STAT6P42226 847 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 PANK2Q9BZ23 570 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 IQCGQ9H095 443 aaKnown RBP17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 PARP3Q9Y6F1 533 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 CCDC155Q8N6L0 562 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 SPAG5Q96R06 1193 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 C6orf50Q9HD87 102 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 JADE2Q9NQC1 790 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 NDC80O14777 642 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 ZSCAN30Q86W11 494 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 SPATA24Q86W54 205 aa17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 NKTRP30414 1462 aaKnown RBP17.94■□□□□ 0.46
NUCKS1-201ENST00000367142 CTR9Q6PD62 1173 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 VEZTQ9HBM0 779 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 CKAP4Q07065 602 aaKnown RBP17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 RRAGBQ5VZM2 374 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 CCDC117Q8IWD4 279 aaPredicted RBP17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 JDP2Q8WYK2 163 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.93■□□□□ 0.466e-18■■■■□ 24.9
NUCKS1-201ENST00000367142 MRVI1Q9Y6F6 885 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 CGNQ9P2M7 1197 aaKnown RBP17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 A0A1W2PRG0 241 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 FAM107BQ9H098 131 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 RASAL2Q9UJF2 1139 aa17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 LMOD1P29536 600 aaPredicted RBP17.93■□□□□ 0.46
NUCKS1-201ENST00000367142 ESPNB1AK53 854 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 NSD2O96028 1365 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 TCHPQ9BT92 498 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 NAA16Q6N069 864 aaPredicted RBP17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 AKR1B10O60218 316 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 CTAGE1Q96RT6 745 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 APBB1IPQ7Z5R6 666 aaPredicted RBP17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 MSANTD4Q8NCY6 345 aa17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 PUS7Q96PZ0 661 aaKnown RBP17.92■□□□□ 0.46
NUCKS1-201ENST00000367142 N4BP3O15049 544 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 NAPAP54920 295 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 RAB11FIP4Q86YS3 637 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 ZBTB43O43298 467 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 CALM1P0DP23 149 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 CALM2P0DP24 149 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 CALM3P0DP25 149 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 ZSCAN16Q9H4T2 348 aaPredicted RBP17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 RTN1Q16799 776 aa17.91■□□□□ 0.46
NUCKS1-201ENST00000367142 RBM25P49756 843 aaKnown RBP17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 CHRNA2Q15822 529 aa17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 KLF18A0A0U1RQI7 1052 aa17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 TRMT1Q9NXH9 659 aaKnown RBP17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 SPDYE3A6NKU9 549 aa17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 SLU7O95391 586 aaKnown RBP17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 PLCG2P16885 1265 aa17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 ATP2B3Q16720 1220 aa17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 EYA3Q99504 573 aa17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 SELENOOQ9BVL4 669 aa17.9■□□□□ 0.46
NUCKS1-201ENST00000367142 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 FAM13AO94988 1023 aa17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 BIN2Q9UBW5 565 aaPredicted RBP17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 HSF2BPO75031 334 aa17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 CYLC1P35663 651 aaPredicted RBP17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 CEBPAP49715 358 aaPredicted RBP17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 ARAP1Q96P48 1450 aa17.89■□□□□ 0.45
NUCKS1-201ENST00000367142 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 TFIP11Q9UBB9 837 aaKnown RBP17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 NIP7Q9Y221 180 aaKnown RBP eCLIP17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 CAVIN2O95810 425 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 SYKP43405 635 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 TNNI2P48788 182 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 CCDC77Q9BR77 488 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 ATP2A1O14983 1001 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 RTL9Q8NET4 1388 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 MAGEB6P1A0A0J9YX57 407 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
NUCKS1-201ENST00000367142 RBM26Q5T8P6 1007 aaKnown RBP17.87■□□□□ 0.45
NUCKS1-201ENST00000367142 IL27Q8NEV9 243 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms