RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 RAD50Q92878 1312 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 GRM8O00222 908 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 HSPA4P34932 840 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 ERO1AQ96HE7 468 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 MPHOSPH8Q99549 860 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 SLC12A7Q9Y666 1083 aa20.61■□□□□ 0.89
SMG5-201ENST00000361813 WDR7Q9Y4E6 1490 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 RIMS2Q9UQ26 1411 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 APOBRQ0VD83 1088 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 NAPBQ9H115 298 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 AMOTL2Q9Y2J4 779 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 LRMPQ12912 555 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 ELF2Q15723 593 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 IFIT3O14879 490 aaKnown RBP20.6■□□□□ 0.89
SMG5-201ENST00000361813 MCMDC2Q4G0Z9 681 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 ODF2Q5BJF6 829 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 KCNH5Q8NCM2 988 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 AKAP2Q9Y2D5 859 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
SMG5-201ENST00000361813 SPTLC2O15270 562 aa20.59■□□□□ 0.89
SMG5-201ENST00000361813 A0A1B0GVL5 298 aa20.59■□□□□ 0.89
SMG5-201ENST00000361813 PTPDC1A2A3K4 754 aa20.59■□□□□ 0.89
SMG5-201ENST00000361813 LRP2BPQ9P2M1 347 aa20.59■□□□□ 0.89
SMG5-201ENST00000361813 SHTN1A0MZ66 631 aa20.58■□□□□ 0.89
SMG5-201ENST00000361813 CDC37L1Q7L3B6 337 aa20.58■□□□□ 0.89
SMG5-201ENST00000361813 MINDY4BA8MYZ0 360 aa20.58■□□□□ 0.89
SMG5-201ENST00000361813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.58■□□□□ 0.89
SMG5-201ENST00000361813 CLSTN2Q9H4D0 955 aa20.58■□□□□ 0.89
SMG5-201ENST00000361813 LUC7LQ9NQ29 371 aaKnown RBP20.58■□□□□ 0.89
SMG5-201ENST00000361813 METAP2P50579 478 aaKnown RBP eCLIP20.58■□□□□ 0.883e-7■■□□□ 14.4
SMG5-201ENST00000361813 LEO1Q8WVC0 666 aaPredicted RBP20.58■□□□□ 0.88
SMG5-201ENST00000361813 RBM33Q96EV2 1170 aaKnown RBP20.58■□□□□ 0.88
SMG5-201ENST00000361813 TMX4Q9H1E5 349 aaPredicted RBP20.58■□□□□ 0.88
SMG5-201ENST00000361813 BCORL1Q5H9F3 1711 aa20.58■□□□□ 0.88
SMG5-201ENST00000361813 IBSPP21815 317 aaPredicted RBP20.58■□□□□ 0.88
SMG5-201ENST00000361813 SSRP1Q08945 709 aaKnown RBP20.58■□□□□ 0.88
SMG5-201ENST00000361813 SRRTQ9BXP5 876 aaKnown RBP20.57■□□□□ 0.88
SMG5-201ENST00000361813 ABCF2Q9UG63 623 aa20.57■□□□□ 0.88
SMG5-201ENST00000361813 POTEB2H3BUK9 544 aa20.57■□□□□ 0.88
SMG5-201ENST00000361813 ALDH1L1O75891 902 aa20.57■□□□□ 0.88
SMG5-201ENST00000361813 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
SMG5-201ENST00000361813 CCDC191Q8NCU4 936 aa20.57■□□□□ 0.88
SMG5-201ENST00000361813 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
SMG5-201ENST00000361813 UTP14AQ9BVJ6 771 aaKnown RBP20.57■□□□□ 0.88
SMG5-201ENST00000361813 NSFL1CQ9UNZ2 370 aaKnown RBP20.57■□□□□ 0.88
SMG5-201ENST00000361813 NCOA7Q8NI08 942 aa20.57■□□□□ 0.88
SMG5-201ENST00000361813 FAM227BQ96M60 508 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 EYA1Q99502 592 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 DNA2P51530 1060 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 STRN4Q9NRL3 753 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 IBTKQ9P2D0 1353 aaPredicted RBP20.56■□□□□ 0.88
SMG5-201ENST00000361813 SPA17Q15506 151 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 ALG1Q9BT22 464 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 NPATQ14207 1427 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 KARSQ15046 597 aaKnown RBP20.56■□□□□ 0.88
SMG5-201ENST00000361813 SLC26A6Q9BXS9 759 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 ZHX3Q9H4I2 956 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 PYCARDQ9ULZ3 195 aa20.56■□□□□ 0.88
SMG5-201ENST00000361813 DENND4BO75064 1496 aaPredicted RBP20.56■□□□□ 0.88
SMG5-201ENST00000361813 CCDC196A0A1B0GTZ2 297 aa20.55■□□□□ 0.88
SMG5-201ENST00000361813 CT47A1Q5JQC4 288 aaPredicted RBP20.55■□□□□ 0.88
SMG5-201ENST00000361813 PROSER2Q86WR7 435 aaPredicted RBP20.55■□□□□ 0.88
SMG5-201ENST00000361813 ZBTB3Q9H5J0 574 aa20.55■□□□□ 0.88
SMG5-201ENST00000361813 YEATS4O95619 227 aa20.55■□□□□ 0.88
SMG5-201ENST00000361813 SIRT2Q8IXJ6 389 aa20.55■□□□□ 0.88
SMG5-201ENST00000361813 TOM1L2Q6ZVM7 507 aa20.55■□□□□ 0.88
SMG5-201ENST00000361813 RSPH14Q9UHP6 348 aa20.55■□□□□ 0.88
SMG5-201ENST00000361813 SLC27A2O14975 620 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 PHACTR2O75167 634 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 FAM160A1Q05DH4 1040 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 TMEM67Q5HYA8 995 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 CTR9Q6PD62 1173 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 ANKRD13DQ6ZTN6 518 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 N4BP3O15049 544 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 CAPN2P17655 700 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 ABCC10Q5T3U5 1492 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 KRT18P05783 430 aaKnown RBP20.54■□□□□ 0.88
SMG5-201ENST00000361813 RPS6KB1P23443 525 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 GABPB1Q06547 395 aaPredicted RBP20.54■□□□□ 0.88
SMG5-201ENST00000361813 TUBB4AP04350 444 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 SSBP05455 408 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMG5-201ENST00000361813 COPS6Q7L5N1 327 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
SMG5-201ENST00000361813 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
SMG5-201ENST00000361813 MCM3P25205 808 aa20.53■□□□□ 0.88
SMG5-201ENST00000361813 DHX32Q7L7V1 743 aaKnown RBP20.53■□□□□ 0.88
SMG5-201ENST00000361813 GNL3LQ9NVN8 582 aaKnown RBP20.53■□□□□ 0.88
SMG5-201ENST00000361813 PHF8Q9UPP1 1060 aa20.53■□□□□ 0.88
SMG5-201ENST00000361813 EVCP57679 992 aa20.53■□□□□ 0.88
SMG5-201ENST00000361813 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
SMG5-201ENST00000361813 LZTFL1Q9NQ48 299 aa20.53■□□□□ 0.88
SMG5-201ENST00000361813 MYO6Q9UM54 1294 aa20.53■□□□□ 0.88
SMG5-201ENST00000361813 NBPF7P0C2Y1 421 aaPredicted RBP20.53■□□□□ 0.88
SMG5-201ENST00000361813 AFMP43652 599 aa20.52■□□□□ 0.88
SMG5-201ENST00000361813 PUF60Q9UHX1 559 aaKnown RBP20.52■□□□□ 0.88
SMG5-201ENST00000361813 ME3Q16798 604 aa20.52■□□□□ 0.88
SMG5-201ENST00000361813 CTAGE15A4D2H0 777 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms