RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 CTSWP56202 376 aa22.51■■□□□ 1.19
CLK2-202ENST00000361168 ANKRD44Q8N8A2 993 aa22.51■■□□□ 1.19
CLK2-202ENST00000361168 GREM2Q9H772 168 aa22.51■■□□□ 1.19
CLK2-202ENST00000361168 SEC31BQ9NQW1 1179 aa22.51■■□□□ 1.19
CLK2-202ENST00000361168 KIAA1551Q9HCM1 1747 aa22.5■■□□□ 1.19
CLK2-202ENST00000361168 LMBR1LQ6UX01 489 aa22.5■■□□□ 1.19
CLK2-202ENST00000361168 LAMB2P55268 1798 aa22.49■■□□□ 1.19
CLK2-202ENST00000361168 PLA2G12BQ9BX93 195 aa22.49■■□□□ 1.19
CLK2-202ENST00000361168 H0YIN7 160 aa22.49■■□□□ 1.19
CLK2-202ENST00000361168 FAM161AQ3B820 660 aa22.49■■□□□ 1.19
CLK2-202ENST00000361168 ZBTB40Q9NUA8 1239 aa22.49■■□□□ 1.19
CLK2-202ENST00000361168 DDX19BQ9UMR2 479 aa22.49■■□□□ 1.19
CLK2-202ENST00000361168 RIC1Q4ADV7 1423 aa22.48■■□□□ 1.19
CLK2-202ENST00000361168 TAF1P21675 1872 aa22.48■■□□□ 1.19
CLK2-202ENST00000361168 CSF1RP07333 972 aa22.48■■□□□ 1.19
CLK2-202ENST00000361168 TGFB2P61812 414 aa22.48■■□□□ 1.19
CLK2-202ENST00000361168 SF3B3Q15393 1217 aaKnown RBP22.48■■□□□ 1.19
CLK2-202ENST00000361168 ZNF622Q969S3 477 aaKnown RBP eCLIP22.48■■□□□ 1.196e-7■■□□□ 13.2
CLK2-202ENST00000361168 GNAI3P08754 354 aa22.47■■□□□ 1.19
CLK2-202ENST00000361168 EXOC6Q8TAG9 804 aa22.47■■□□□ 1.19
CLK2-202ENST00000361168 CHMP3Q9Y3E7 222 aa22.47■■□□□ 1.19
CLK2-202ENST00000361168 CELF1Q92879 486 aaKnown RBP22.46■■□□□ 1.19
CLK2-202ENST00000361168 GNAI2P04899 355 aa22.45■■□□□ 1.18
CLK2-202ENST00000361168 RABL6Q3YEC7 729 aaPredicted RBP22.45■■□□□ 1.18
CLK2-202ENST00000361168 OLFM4Q6UX06 510 aa22.45■■□□□ 1.18
CLK2-202ENST00000361168 KLHDC4Q8TBB5 520 aa22.45■■□□□ 1.18
CLK2-202ENST00000361168 RPGRQ92834 1020 aaKnown RBP22.45■■□□□ 1.18
CLK2-202ENST00000361168 MASTLQ96GX5 879 aa22.45■■□□□ 1.18
CLK2-202ENST00000361168 PNMA6EA0A0J9YXQ4 647 aa22.44■■□□□ 1.18
CLK2-202ENST00000361168 ITGA6P23229 1130 aa22.44■■□□□ 1.18
CLK2-202ENST00000361168 CCDC152Q4G0S7 254 aa22.44■■□□□ 1.18
CLK2-202ENST00000361168 ZNF594Q96JF6 807 aaPredicted RBP22.44■■□□□ 1.18
CLK2-202ENST00000361168 NPR1P16066 1061 aa22.43■■□□□ 1.18
CLK2-202ENST00000361168 HOXA10P31260 410 aaPredicted RBP22.43■■□□□ 1.18
CLK2-202ENST00000361168 ZNF219Q9P2Y4 722 aaPredicted RBP22.43■■□□□ 1.18
CLK2-202ENST00000361168 MYH3P11055 1940 aa22.42■■□□□ 1.18
CLK2-202ENST00000361168 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
CLK2-202ENST00000361168 HSP90B1P14625 803 aaKnown RBP22.41■■□□□ 1.18
CLK2-202ENST00000361168 PRPF40BQ6NWY9 871 aaKnown RBP22.41■■□□□ 1.18
CLK2-202ENST00000361168 SIRT2Q8IXJ6 389 aa22.41■■□□□ 1.18
CLK2-202ENST00000361168 PIM2Q9P1W9 311 aa22.41■■□□□ 1.18
CLK2-202ENST00000361168 STYK1Q6J9G0 422 aa22.4■■□□□ 1.18
CLK2-202ENST00000361168 RBM17Q96I25 401 aaKnown RBP22.4■■□□□ 1.18
CLK2-202ENST00000361168 CEP85Q6P2H3 762 aa22.39■■□□□ 1.18
CLK2-202ENST00000361168 PCDHB15Q9Y5E8 787 aa22.39■■□□□ 1.18
CLK2-202ENST00000361168 SLX4Q8IY92 1834 aa22.39■■□□□ 1.18
CLK2-202ENST00000361168 SRGAP3O43295 1099 aa22.39■■□□□ 1.17
CLK2-202ENST00000361168 RFX5P48382 616 aaPredicted RBP22.39■■□□□ 1.17
CLK2-202ENST00000361168 GRAPQ13588 217 aa22.39■■□□□ 1.17
CLK2-202ENST00000361168 TTLL6Q8N841 843 aa22.39■■□□□ 1.17
CLK2-202ENST00000361168 GRAPLQ8TC17 118 aaPredicted RBP22.39■■□□□ 1.17
CLK2-202ENST00000361168 CRAMP1Q96RY5 1269 aa22.39■■□□□ 1.17
CLK2-202ENST00000361168 PA2G4Q9UQ80 394 aaKnown RBP22.39■■□□□ 1.17
CLK2-202ENST00000361168 BCS1LQ9Y276 419 aa22.39■■□□□ 1.17
CLK2-202ENST00000361168 IFIT5Q13325 482 aaKnown RBP22.38■■□□□ 1.17
CLK2-202ENST00000361168 PUS3Q9BZE2 481 aaKnown RBP22.38■■□□□ 1.17
CLK2-202ENST00000361168 BRCA1P38398 1863 aaKnown RBP22.38■■□□□ 1.17
CLK2-202ENST00000361168 CACNA1SQ13698 1873 aa22.38■■□□□ 1.17
CLK2-202ENST00000361168 DLEC1Q9Y238 1755 aa22.38■■□□□ 1.17
CLK2-202ENST00000361168 YBX3P16989 372 aaKnown RBP eCLIP22.37■■□□□ 1.17
CLK2-202ENST00000361168 RPS8P62241 208 aaKnown RBP22.37■■□□□ 1.17
CLK2-202ENST00000361168 CCDC57Q2TAC2 916 aa22.37■■□□□ 1.17
CLK2-202ENST00000361168 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
CLK2-202ENST00000361168 RTL9Q8NET4 1388 aa22.37■■□□□ 1.17
CLK2-202ENST00000361168 C21orf2O43822 256 aa22.37■■□□□ 1.17
CLK2-202ENST00000361168 MTX1Q13505 466 aa22.37■■□□□ 1.17
CLK2-202ENST00000361168 ANKRD18BA2A2Z9 1011 aa22.36■■□□□ 1.17
CLK2-202ENST00000361168 ALDH1B1P30837 517 aa22.36■■□□□ 1.17
CLK2-202ENST00000361168 PTPN12Q05209 780 aaKnown RBP22.36■■□□□ 1.17
CLK2-202ENST00000361168 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
CLK2-202ENST00000361168 C7orf43Q8WVR3 580 aa22.36■■□□□ 1.17
CLK2-202ENST00000361168 CNKSR1Q969H4 720 aa22.36■■□□□ 1.17
CLK2-202ENST00000361168 WTIPA6NIX2 430 aaPredicted RBP22.35■■□□□ 1.17
CLK2-202ENST00000361168 ATP8B2P98198 1209 aa22.35■■□□□ 1.17
CLK2-202ENST00000361168 PDZRN3Q9UPQ7 1066 aa22.35■■□□□ 1.17
CLK2-202ENST00000361168 PPEF1O14829 653 aaPredicted RBP22.35■■□□□ 1.17
CLK2-202ENST00000361168 SIL1Q9H173 461 aa22.35■■□□□ 1.17
CLK2-202ENST00000361168 LRRC24Q50LG9 513 aa22.34■■□□□ 1.17
CLK2-202ENST00000361168 ANKRD18AQ8IVF6 992 aa22.34■■□□□ 1.17
CLK2-202ENST00000361168 HDAC5Q9UQL6 1122 aa22.33■■□□□ 1.17
CLK2-202ENST00000361168 CDC5LQ99459 802 aaKnown RBP22.33■■□□□ 1.16
CLK2-202ENST00000361168 BBOX1O75936 387 aa22.32■■□□□ 1.16
CLK2-202ENST00000361168 POLA2Q14181 598 aa22.32■■□□□ 1.16
CLK2-202ENST00000361168 TAF7LQ5H9L4 462 aa22.32■■□□□ 1.16
CLK2-202ENST00000361168 SSH3Q8TE77 659 aa22.32■■□□□ 1.16
CLK2-202ENST00000361168 SNAP23O00161 211 aa22.31■■□□□ 1.16
CLK2-202ENST00000361168 LDHAL6AQ6ZMR3 332 aa22.31■■□□□ 1.16
CLK2-202ENST00000361168 HELBQ8NG08 1087 aaPredicted RBP22.31■■□□□ 1.16
CLK2-202ENST00000361168 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.31■■□□□ 1.16
CLK2-202ENST00000361168 SPEF2Q9C093 1822 aa22.31■■□□□ 1.16
CLK2-202ENST00000361168 MPHOSPH8Q99549 860 aa22.31■■□□□ 1.16
CLK2-202ENST00000361168 CHMP4BQ9H444 224 aaKnown RBP22.31■■□□□ 1.16
CLK2-202ENST00000361168 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
CLK2-202ENST00000361168 ATP6V0A2Q9Y487 856 aa22.31■■□□□ 1.16
CLK2-202ENST00000361168 IGHMBP2P38935 993 aaKnown RBP22.3■■□□□ 1.16
CLK2-202ENST00000361168 MINPP1Q9UNW1 487 aa22.3■■□□□ 1.16
CLK2-202ENST00000361168 TAF5LO75529 589 aa22.29■■□□□ 1.16
CLK2-202ENST00000361168 ATG9AQ7Z3C6 839 aa22.29■■□□□ 1.16
CLK2-202ENST00000361168 RPAP2Q8IXW5 612 aaPredicted RBP22.29■■□□□ 1.16
CLK2-202ENST00000361168 RIPOR2Q9Y4F9 1068 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms