RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 MYL6BP14649 208 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.53
RNF40-202ENST00000357890 NBPF6Q5VWK0 638 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 DDX11Q96FC9 970 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 NBPF4Q96M43 638 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 GTF2A1P52655 376 aaPredicted RBP11.71□□□□□ -0.54
RNF40-202ENST00000357890 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.54
RNF40-202ENST00000357890 NEK11Q8NG66 645 aa11.71□□□□□ -0.54
RNF40-202ENST00000357890 KIAA1524Q8TCG1 905 aa11.71□□□□□ -0.54
RNF40-202ENST00000357890 FAM200AQ8TCP9 573 aa11.71□□□□□ -0.54
RNF40-202ENST00000357890 SDF4Q9BRK5 362 aa11.71□□□□□ -0.54
RNF40-202ENST00000357890 DNAJC25Q9H1X3 360 aa11.71□□□□□ -0.54
RNF40-202ENST00000357890 SH2B1Q9NRF2 756 aaPredicted RBP11.71□□□□□ -0.54
RNF40-202ENST00000357890 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.54
RNF40-202ENST00000357890 URI1O94763 535 aaPredicted RBP11.7□□□□□ -0.54
RNF40-202ENST00000357890 LEKR1Q6ZMV7 388 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 LRRC59Q96AG4 307 aaKnown RBP11.7□□□□□ -0.54
RNF40-202ENST00000357890 TTC41PQ6P2S7 1318 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 RAD50Q92878 1312 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 CEP170BQ9Y4F5 1589 aaPredicted RBP11.7□□□□□ -0.54
RNF40-202ENST00000357890 TSPYL1Q9H0U9 437 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 RSPH14Q9UHP6 348 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 ST7Q9NRC1 585 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
RNF40-202ENST00000357890 TYRO3Q06418 890 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 CWF19L2Q2TBE0 894 aaKnown RBP11.69□□□□□ -0.54
RNF40-202ENST00000357890 CCDC73Q6ZRK6 1079 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 CCDC191Q8NCU4 936 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 CCDC34Q96HJ3 373 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 AK7Q96M32 723 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 NEUROD6Q96NK8 337 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 DACT1Q9NYF0 836 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
RNF40-202ENST00000357890 PPFIA3O75145 1194 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 KSR2Q6VAB6 950 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 NLRP2Q9NX02 1062 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
RNF40-202ENST00000357890 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
RNF40-202ENST00000357890 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 KRBA2Q6ZNG9 492 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 RUFY3Q7L099 469 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 HSPA2P54652 639 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 ANKRD1Q15327 319 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 ARHGAP29Q52LW3 1261 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 TTLL5Q6EMB2 1281 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 ZSWIM4Q9H7M6 989 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 ARHGAP23Q9P227 1491 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 SLIT1O75093 1534 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 SLU7O95391 586 aaKnown RBP11.68□□□□□ -0.54
RNF40-202ENST00000357890 PDILTQ8N807 584 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 ADAMTSL3P82987 1691 aa11.68□□□□□ -0.54
RNF40-202ENST00000357890 KCNQ3O43525 872 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 IBSPP21815 317 aaPredicted RBP11.67□□□□□ -0.54
RNF40-202ENST00000357890 SNW1Q13573 536 aaKnown RBP11.67□□□□□ -0.54
RNF40-202ENST00000357890 TERF2Q15554 542 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 CREBRFQ8IUR6 639 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 ANKARQ7Z5J8 1434 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 ANKRD24Q8TF21 1146 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 RNMTO43148 476 aaKnown RBP11.67□□□□□ -0.54
RNF40-202ENST00000357890 KINO60870 393 aaKnown RBP11.67□□□□□ -0.54
RNF40-202ENST00000357890 ATF3P18847 181 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 PTH1RQ03431 593 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 POLA2Q14181 598 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 SCAND2PQ9GZW5 306 aaPredicted RBP11.67□□□□□ -0.54
RNF40-202ENST00000357890 IL25Q9H293 177 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 RASSF4Q9H2L5 321 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 NRXN3Q9Y4C0 1643 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 GCP02774 474 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 LARP1Q6PKG0 1096 aaKnown RBP11.67□□□□□ -0.54
RNF40-202ENST00000357890 LINS1Q8NG48 757 aa11.67□□□□□ -0.54
RNF40-202ENST00000357890 GRM8O00222 908 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 FAM227BQ96M60 508 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 SALL3Q9BXA9 1300 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 ERCC6LQ2NKX8 1250 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 SYT10Q6XYQ8 523 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 DEF6Q9H4E7 631 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
RNF40-202ENST00000357890 HSP90B2PQ58FF3 399 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 VPS53Q5VIR6 699 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 CREB3L3Q68CJ9 461 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 PI4K2BQ8TCG2 481 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 CTNNA3Q9UI47 895 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
RNF40-202ENST00000357890 HNRNPH2P55795 449 aaKnown RBP11.65□□□□□ -0.54
RNF40-202ENST00000357890 UBR1Q8IWV7 1749 aa11.65□□□□□ -0.54
RNF40-202ENST00000357890 CCDC69A6NI79 296 aa11.65□□□□□ -0.54
RNF40-202ENST00000357890 TATP17735 454 aaPredicted RBP11.65□□□□□ -0.54
RNF40-202ENST00000357890 ZC3H6P61129 1189 aaKnown RBP11.65□□□□□ -0.54
RNF40-202ENST00000357890 LRRC2Q9BYS8 371 aa11.65□□□□□ -0.54
RNF40-202ENST00000357890 DNAI1Q9UI46 699 aa11.65□□□□□ -0.54
RNF40-202ENST00000357890 NRKQ7Z2Y5 1582 aa11.65□□□□□ -0.54
RNF40-202ENST00000357890 LARGE1O95461 756 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms