RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MTHFSDQ2M296 383 aaKnown RBP7.13□□□□□ -1.27
CD47-201ENST00000355354 GVINP1Q7Z2Y8 2422 aa7.13□□□□□ -1.27
CD47-201ENST00000355354 PALLDQ8WX93 1383 aa7.13□□□□□ -1.27
CD47-201ENST00000355354 ZNF853P0CG23 659 aa7.13□□□□□ -1.27
CD47-201ENST00000355354 TTC12Q9H892 705 aaPredicted RBP7.13□□□□□ -1.27
CD47-201ENST00000355354 DCHS2Q6V1P9 2916 aa7.13□□□□□ -1.27
CD47-201ENST00000355354 NRBP1Q9UHY1 535 aa7.13□□□□□ -1.27
CD47-201ENST00000355354 CYP2E1P05181 493 aaPredicted RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 ANP32AP39687 249 aaKnown RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 PI16Q6UXB8 463 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 VEGFAP15692 232 aaPredicted RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 SLC39A6Q13433 755 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 CWF19L2Q2TBE0 894 aaKnown RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 NLGN2Q8NFZ4 835 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 C22orf23Q9BZE7 217 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 ZNF609O15014 1411 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 SLC16A10Q8TF71 515 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 TRAK2O60296 914 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 PTH1RQ03431 593 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 SOS1Q07889 1333 aaPredicted RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 COL23A1Q86Y22 540 aaPredicted RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 ANKRD24Q8TF21 1146 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 LRRC2Q9BYS8 371 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 FHDC1Q9C0D6 1143 aaPredicted RBP7.12□□□□□ -1.27
CD47-201ENST00000355354 EPC1Q9H2F5 836 aa7.12□□□□□ -1.27
CD47-201ENST00000355354 FOXP2O15409 715 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 IL2RBP14784 551 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 LRMPQ12912 555 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 DDB1Q16531 1140 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 USP44Q9H0E7 712 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 SPG7Q9UQ90 795 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 FOCADQ5VW36 1801 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 CRYBG3Q68DQ2 2970 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 TACC3Q9Y6A5 838 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 CACNA1GO43497 2377 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 PHIPQ8WWQ0 1821 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 RAB11FIP4Q86YS3 637 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 CHMP4CQ96CF2 233 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 CNTNAP4Q9C0A0 1308 aa7.11□□□□□ -1.27
CD47-201ENST00000355354 MRPL50Q8N5N7 158 aaKnown RBP7.11□□□□□ -1.27
CD47-201ENST00000355354 HSP90AB3PQ58FF7 597 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 CENPQQ7L2Z9 268 aaPredicted RBP7.1□□□□□ -1.27
CD47-201ENST00000355354 LINC00116Q8NCU8 138 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 EYA1Q99502 592 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 CHMP3Q9Y3E7 222 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 MYH13Q9UKX3 1938 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 ABL1P00519 1130 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 ITPK1Q13572 414 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 NGDNQ8NEJ9 315 aaKnown RBP7.1□□□□□ -1.27
CD47-201ENST00000355354 LMBRD1Q9NUN5 540 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 CDK5RAP2Q96SN8 1893 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 WDR43Q15061 677 aaKnown RBP eCLIP7.1□□□□□ -1.27
CD47-201ENST00000355354 NUTM1Q86Y26 1132 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 NECAB1Q8N987 351 aa7.1□□□□□ -1.27
CD47-201ENST00000355354 KIF3CO14782 793 aa7.09□□□□□ -1.27
CD47-201ENST00000355354 SENP2Q9HC62 589 aa7.09□□□□□ -1.27
CD47-201ENST00000355354 PRDM4Q9UKN5 801 aa7.09□□□□□ -1.27
CD47-201ENST00000355354 CHST3Q7LGC8 479 aa7.09□□□□□ -1.27
CD47-201ENST00000355354 SPON1Q9HCB6 807 aa7.09□□□□□ -1.27
CD47-201ENST00000355354 DZIP1LQ8IYY4 767 aaKnown RBP7.09□□□□□ -1.27
CD47-201ENST00000355354 MRVI1Q9Y6F6 885 aa7.09□□□□□ -1.27
CD47-201ENST00000355354 FERMT3Q86UX7 667 aa7.09□□□□□ -1.27
CD47-201ENST00000355354 NEDD4P46934 1319 aa7.09□□□□□ -1.28
CD47-201ENST00000355354 LRP10Q7Z4F1 713 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 SHISA4Q96DD7 197 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 POTECB2RU33 542 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 NLRP6P59044 892 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 NUCB1Q02818 461 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 WNT7AO00755 349 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 SLC4A10Q6U841 1118 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 STK11IPQ8N1F8 1099 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 FAM227BQ96M60 508 aa7.08□□□□□ -1.28
CD47-201ENST00000355354 ZNF589Q86UQ0 364 aaPredicted RBP7.07□□□□□ -1.28
CD47-201ENST00000355354 TM4SF1P30408 202 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 VPS53Q5VIR6 699 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 JMYQ8N9B5 988 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 BCL2L12Q9HB09 334 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 CEP85Q6P2H3 762 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 PIGBQ92521 554 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 AHCTF1Q8WYP5 2266 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 KLRG2A4D1S0 409 aaPredicted RBP7.07□□□□□ -1.28
CD47-201ENST00000355354 A1BGP04217 495 aa7.07□□□□□ -1.28
CD47-201ENST00000355354 CCDC85AQ96PX6 553 aaPredicted RBP7.07□□□□□ -1.28
CD47-201ENST00000355354 KDM4AO75164 1064 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 CCDC129Q6ZRS4 1044 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 CHD1LQ86WJ1 897 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 RUNDC1Q96C34 613 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 KCNF1Q9H3M0 494 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 ATG3Q9NT62 314 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 FAM170AA1A519 330 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 ATP2B3Q16720 1220 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 RC3H1Q5TC82 1133 aaKnown RBP7.06□□□□□ -1.28
CD47-201ENST00000355354 INTS5Q6P9B9 1019 aaKnown RBP7.06□□□□□ -1.28
CD47-201ENST00000355354 CD2APQ9Y5K6 639 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 USP27XA6NNY8 438 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 OTUD7BQ6GQQ9 843 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 CARMIL3Q8ND23 1372 aa7.06□□□□□ -1.28
CD47-201ENST00000355354 BAG4O95429 457 aaKnown RBP7.06□□□□□ -1.28
CD47-201ENST00000355354 PHKG2P15735 406 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms