RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PSMD1Q99460 953 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 ESR2Q92731 530 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 GNAQP50148 359 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 MMRN2Q9H8L6 949 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 STX8Q9UNK0 236 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.43■■□□□ 1.82
NPAS3-201ENST00000346562 CAVIN2O95810 425 aa26.43■■□□□ 1.82
NPAS3-201ENST00000346562 CYP7A1P22680 504 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 ANKRD36BQ8N2N9 1353 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 TRIM27P14373 513 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 ANKRD13DQ6ZTN6 518 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 WDR97A6NE52 1622 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 RNF187Q5TA31 235 aaPredicted RBP26.42■■□□□ 1.82
NPAS3-201ENST00000346562 OGFOD1Q8N543 542 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 FAM107BQ9H098 131 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 SLC4A4Q9Y6R1 1079 aa26.42■■□□□ 1.82
NPAS3-201ENST00000346562 PI4KAP2A4QPH2 592 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 PHACTR2O75167 634 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 SPECC1LQ69YQ0 1117 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 MAATS1Q7Z4T9 603 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 PI4KAP1Q8N8J0 262 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 SMARCC1Q92922 1105 aaPredicted RBP26.41■■□□□ 1.82
NPAS3-201ENST00000346562 CTAGE1Q96RT6 745 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 STAT6P42226 847 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 KIAA0753Q2KHM9 967 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 CTR9Q6PD62 1173 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 VTI1AQ96AJ9 217 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 PTPN23Q9H3S7 1636 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 ATP6V1AP38606 617 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 PANK2Q9BZ23 570 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 JADE2Q9NQC1 790 aa26.41■■□□□ 1.82
NPAS3-201ENST00000346562 PPP1R14CQ8TAE6 165 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 MBIPQ9NS73 344 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 TRMT1Q9NXH9 659 aaKnown RBP26.4■■□□□ 1.82
NPAS3-201ENST00000346562 IL16Q14005 1332 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 ABCC5O15440 1437 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 MRPS9P82933 396 aaKnown RBP26.4■■□□□ 1.82
NPAS3-201ENST00000346562 NOS1P29475 1434 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 TTC22Q5TAA0 569 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 RRAGBQ5VZM2 374 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 ADGRF5Q8IZF2 1346 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 ZNF354CQ86Y25 554 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 FBXO31Q5XUX0 539 aaPredicted RBP26.4■■□□□ 1.82
NPAS3-201ENST00000346562 NYXQ9GZU5 481 aa26.4■■□□□ 1.82
NPAS3-201ENST00000346562 ZBTB43O43298 467 aa26.39■■□□□ 1.82
NPAS3-201ENST00000346562 RBM25P49756 843 aaKnown RBP26.39■■□□□ 1.82
NPAS3-201ENST00000346562 CCDC184Q52MB2 194 aa26.39■■□□□ 1.82
NPAS3-201ENST00000346562 C6orf163Q5TEZ5 329 aa26.39■■□□□ 1.82
NPAS3-201ENST00000346562 KLF18A0A0U1RQI7 1052 aa26.39■■□□□ 1.82
NPAS3-201ENST00000346562 CEP112Q8N8E3 955 aa26.39■■□□□ 1.82
NPAS3-201ENST00000346562 SMARCC2Q8TAQ2 1214 aa26.39■■□□□ 1.82
NPAS3-201ENST00000346562 ZCRB1Q8TBF4 217 aaKnown RBP26.39■■□□□ 1.82
NPAS3-201ENST00000346562 TFIP11Q9UBB9 837 aaKnown RBP26.39■■□□□ 1.82
NPAS3-201ENST00000346562 USP25Q9UHP3 1055 aa26.39■■□□□ 1.82
NPAS3-201ENST00000346562 DENND4BO75064 1496 aaPredicted RBP26.39■■□□□ 1.82
NPAS3-201ENST00000346562 HMGXB3Q12766 1538 aa26.39■■□□□ 1.81
NPAS3-201ENST00000346562 HEATR3Q7Z4Q2 680 aa26.39■■□□□ 1.81
NPAS3-201ENST00000346562 LARP6Q9BRS8 491 aaKnown RBP26.39■■□□□ 1.81
NPAS3-201ENST00000346562 N4BP3O15049 544 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 BMP2KLQ5H9B9 411 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 RAB11FIP4Q86YS3 637 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 TNPO1Q92973 898 aaKnown RBP26.38■■□□□ 1.81
NPAS3-201ENST00000346562 SNW1Q13573 536 aaKnown RBP26.38■■□□□ 1.81
NPAS3-201ENST00000346562 RTN1Q16799 776 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 TBC1D9Q6ZT07 1266 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 ACEP12821 1306 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 PRPHP41219 470 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 MAP3K9P80192 1104 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 NLRP3Q96P20 1036 aa26.38■■□□□ 1.81
NPAS3-201ENST00000346562 NCBP1Q09161 790 aaKnown RBP26.37■■□□□ 1.81
NPAS3-201ENST00000346562 UBE2HP62256 183 aa26.37■■□□□ 1.81
NPAS3-201ENST00000346562 CKAP4Q07065 602 aaKnown RBP26.37■■□□□ 1.81
NPAS3-201ENST00000346562 CLEC11AQ9Y240 323 aa26.37■■□□□ 1.81
NPAS3-201ENST00000346562 SYKP43405 635 aa26.37■■□□□ 1.81
NPAS3-201ENST00000346562 ATP2B3Q16720 1220 aa26.36■■□□□ 1.81
NPAS3-201ENST00000346562 SPAG5Q96R06 1193 aa26.36■■□□□ 1.81
NPAS3-201ENST00000346562 NAA16Q6N069 864 aaPredicted RBP26.36■■□□□ 1.81
NPAS3-201ENST00000346562 CCDC155Q8N6L0 562 aa26.36■■□□□ 1.81
NPAS3-201ENST00000346562 IMPG2Q9BZV3 1241 aa26.36■■□□□ 1.81
NPAS3-201ENST00000346562 RASAL2Q9UJF2 1139 aa26.36■■□□□ 1.81
NPAS3-201ENST00000346562 AKR1B10O60218 316 aa26.36■■□□□ 1.81
NPAS3-201ENST00000346562 CEBPAP49715 358 aaPredicted RBP26.36■■□□□ 1.81
NPAS3-201ENST00000346562 PICALMQ13492 652 aa26.36■■□□□ 1.81
NPAS3-201ENST00000346562 UVSSAQ2YD98 709 aa26.35■■□□□ 1.81
NPAS3-201ENST00000346562 CYLC1P35663 651 aaPredicted RBP26.34■■□□□ 1.81
NPAS3-201ENST00000346562 CHRNA2Q15822 529 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 ALG1Q9BT22 464 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 RTL9Q8NET4 1388 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 NAPAP54920 295 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 C6orf50Q9HD87 102 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 F8W031 263 aaPredicted RBP26.34■■□□□ 1.81
NPAS3-201ENST00000346562 HSF2BPO75031 334 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 IDI1Q13907 227 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 KCNG4Q8TDN1 519 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 C16orf45Q96MC5 204 aaPredicted RBP26.34■■□□□ 1.81
NPAS3-201ENST00000346562 RHPN1Q8TCX5 695 aa26.34■■□□□ 1.81
NPAS3-201ENST00000346562 CALM1P0DP23 149 aa26.33■■□□□ 1.81
NPAS3-201ENST00000346562 CALM2P0DP24 149 aa26.33■■□□□ 1.81
NPAS3-201ENST00000346562 CALM3P0DP25 149 aa26.33■■□□□ 1.81
NPAS3-201ENST00000346562 ZNF165P49910 485 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms