RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 BCL2L12Q9HB09 334 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 COPRSQ9NQ92 184 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 TLR7Q9NYK1 1049 aaKnown RBP5.1□□□□□ -1.59
MCF2-201ENST00000338585 PHF14O94880 888 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 MFAP1P55081 439 aaKnown RBP5.1□□□□□ -1.59
MCF2-201ENST00000338585 RC3H1Q5TC82 1133 aaKnown RBP5.1□□□□□ -1.59
MCF2-201ENST00000338585 USPL1Q5W0Q7 1092 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 BICDL1Q6ZP65 573 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 TBC1D9Q6ZT07 1266 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 AACSQ86V21 672 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 EAF2Q96CJ1 260 aaPredicted RBP5.1□□□□□ -1.59
MCF2-201ENST00000338585 PUS3Q9BZE2 481 aaKnown RBP5.1□□□□□ -1.59
MCF2-201ENST00000338585 STAP2Q9UGK3 403 aa5.1□□□□□ -1.59
MCF2-201ENST00000338585 NIP7Q9Y221 180 aaKnown RBP eCLIP5.1□□□□□ -1.59
MCF2-201ENST00000338585 C4BP0C0L5 1744 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 BCORQ6W2J9 1755 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 IRS4O14654 1257 aaPredicted RBP5.09□□□□□ -1.59
MCF2-201ENST00000338585 HCLS1P14317 486 aaPredicted RBP5.09□□□□□ -1.59
MCF2-201ENST00000338585 TFCP2Q12800 502 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 LRRC24Q50LG9 513 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 ERC1Q8IUD2 1116 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 PROM2Q8N271 834 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 CLASRPQ8N2M8 674 aaKnown RBP5.09□□□□□ -1.59
MCF2-201ENST00000338585 ARHGEF1Q92888 912 aaKnown RBP5.09□□□□□ -1.59
MCF2-201ENST00000338585 PLA2G12BQ9BX93 195 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 CCDC8Q9H0W5 538 aaPredicted RBP5.09□□□□□ -1.59
MCF2-201ENST00000338585 CDHR2Q9BYE9 1310 aa5.09□□□□□ -1.59
MCF2-201ENST00000338585 NTSR2O95665 410 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 MAP4K4O95819 1239 aaPredicted RBP5.09□□□□□ -1.6
MCF2-201ENST00000338585 CSF1RP07333 972 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 CTSWP56202 376 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 TBC1D9BQ66K14 1250 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 ATG9AQ7Z3C6 839 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 TTLL11Q8NHH1 800 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 PI4K2BQ8TCG2 481 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 UTP14AQ9BVJ6 771 aaKnown RBP5.09□□□□□ -1.6
MCF2-201ENST00000338585 GREM2Q9H772 168 aa5.09□□□□□ -1.6
MCF2-201ENST00000338585 RTCBQ9Y3I0 505 aaKnown RBP5.09□□□□□ -1.6
MCF2-201ENST00000338585 SCN7AQ01118 1682 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 TUBGCP6Q96RT7 1819 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 CDC45O75419 566 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 IFIT2P09913 472 aaKnown RBP5.08□□□□□ -1.6
MCF2-201ENST00000338585 CCDC57Q2TAC2 916 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 AK7Q96M32 723 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 NARFQ9UHQ1 456 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 ZNF652Q9Y2D9 606 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 SH3TC1Q8TE82 1336 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 TRIM6-TRIM34B2RNG4 842 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 PDE8AO60658 829 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 ITGA6P23229 1130 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 ANP32AP39687 249 aaKnown RBP5.08□□□□□ -1.6
MCF2-201ENST00000338585 IFIT5Q13325 482 aaKnown RBP5.08□□□□□ -1.6
MCF2-201ENST00000338585 TXNRD1Q16881 649 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 PARP10Q53GL7 1025 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 CLEC4GQ6UXB4 293 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 CCDC24Q8N4L8 307 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 RILPL2Q969X0 211 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 C4AP0C0L4 1744 aa5.08□□□□□ -1.6
MCF2-201ENST00000338585 USP42Q9H9J4 1324 aaKnown RBP5.08□□□□□ -1.6
MCF2-201ENST00000338585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.07□□□□□ -1.6
MCF2-201ENST00000338585 EYA2O00167 538 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 ZPR1O75312 459 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 APBA3O96018 575 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 ERFEQ4G0M1 354 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 TNNI3KQ59H18 835 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 C3orf67Q6ZVT6 689 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 ECHDC1Q9NTX5 307 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 DBNLQ9UJU6 430 aaKnown RBP5.07□□□□□ -1.6
MCF2-201ENST00000338585 FPGT-TNNI3KV9GXZ4 949 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 AOX1Q06278 1338 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 DDX60Q8IY21 1712 aaKnown RBP5.07□□□□□ -1.6
MCF2-201ENST00000338585 MYH3P11055 1940 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 RFC4P35249 363 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 TIMM10P62072 90 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 TAF7LQ5H9L4 462 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 SLC27A3Q5K4L6 730 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 TRAPPC3LQ5T215 181 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 TBC1D32Q96NH3 1257 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 DBNDD2Q9BQY9 259 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 SEC31BQ9NQW1 1179 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 ABCC12Q96J65 1359 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 COL4A1P02462 1669 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 UBR3Q6ZT12 1888 aa5.07□□□□□ -1.6
MCF2-201ENST00000338585 CIAO1O76071 339 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 IL15P40933 162 aaPredicted RBP5.06□□□□□ -1.6
MCF2-201ENST00000338585 ZNF827Q17R98 1081 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 RIC1Q4ADV7 1423 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 TTC41PQ6P2S7 1318 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 NDUFB9Q9Y6M9 179 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 ANKRD18BA2A2Z9 1011 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 GLRX3O76003 335 aaKnown RBP5.06□□□□□ -1.6
MCF2-201ENST00000338585 CHMLP26374 656 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 LDHAL6AQ6ZMR3 332 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 EDC3Q96F86 508 aaKnown RBP5.06□□□□□ -1.6
MCF2-201ENST00000338585 NEUROD6Q96NK8 337 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 SETDB2Q96T68 719 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 C22orf23Q9BZE7 217 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 IL25Q9H293 177 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 BOLA2Q9H3K6 86 aa5.06□□□□□ -1.6
MCF2-201ENST00000338585 UPF2Q9HAU5 1272 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms