RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 PCDHB15Q9Y5E8 787 aa21.92■■□□□ 1.1
CHGA-202ENST00000334654 COL4A1P02462 1669 aa21.92■■□□□ 1.1
CHGA-202ENST00000334654 PDE6BP35913 854 aa21.91■■□□□ 1.1
CHGA-202ENST00000334654 CEP85Q6P2H3 762 aa21.91■■□□□ 1.1
CHGA-202ENST00000334654 SIRT2Q8IXJ6 389 aa21.91■■□□□ 1.1
CHGA-202ENST00000334654 SRGNP10124 158 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 ATP8B2P98198 1209 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 AAMPQ13685 434 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 CCDC85AQ96PX6 553 aaPredicted RBP21.9■■□□□ 1.1
CHGA-202ENST00000334654 GREM2Q9H772 168 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 CD2APQ9Y5K6 639 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 SRCAPQ6ZRS2 3230 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 RTL9Q8NET4 1388 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 PNMA6EA0A0J9YXQ4 647 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 FAM161AQ3B820 660 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 SEC31BQ9NQW1 1179 aa21.9■■□□□ 1.1
CHGA-202ENST00000334654 LRP5O75197 1615 aa21.89■■□□□ 1.1
CHGA-202ENST00000334654 DLEC1Q9Y238 1755 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 KCNA3P22001 575 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 CHRNA5P30532 468 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 HOXA10P31260 410 aaPredicted RBP21.89■■□□□ 1.09
CHGA-202ENST00000334654 RFX5P48382 616 aaPredicted RBP21.89■■□□□ 1.09
CHGA-202ENST00000334654 CCDC152Q4G0S7 254 aa21.89■■□□□ 1.09
CHGA-202ENST00000334654 NEFLP07196 543 aa21.88■■□□□ 1.09
CHGA-202ENST00000334654 C2CD5Q86YS7 1000 aa21.88■■□□□ 1.09
CHGA-202ENST00000334654 TGFB2P61812 414 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 POLA2Q14181 598 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 RPAP2Q8IXW5 612 aaPredicted RBP21.87■■□□□ 1.09
CHGA-202ENST00000334654 SSH3Q8TE77 659 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
CHGA-202ENST00000334654 A0A0G2JLW4 131 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 H0YIN7 160 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 NPR1P16066 1061 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 DPEP1P16444 411 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 ITGA6P23229 1130 aa21.86■■□□□ 1.09
CHGA-202ENST00000334654 FHDC1Q9C0D6 1143 aaPredicted RBP21.86■■□□□ 1.09
CHGA-202ENST00000334654 SRGAP3O43295 1099 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 MASTLQ96GX5 879 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 CRAMP1Q96RY5 1269 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 PPP1R1BQ9UD71 204 aaPredicted RBP21.85■■□□□ 1.09
CHGA-202ENST00000334654 CHMP3Q9Y3E7 222 aa21.85■■□□□ 1.09
CHGA-202ENST00000334654 BRCA1P38398 1863 aaKnown RBP21.85■■□□□ 1.09
CHGA-202ENST00000334654 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
CHGA-202ENST00000334654 NLGN2Q8NFZ4 835 aa21.84■■□□□ 1.09
CHGA-202ENST00000334654 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
CHGA-202ENST00000334654 CELF1Q92879 486 aaKnown RBP21.84■■□□□ 1.09
CHGA-202ENST00000334654 PTPN12Q05209 780 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 IFIT5Q13325 482 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 DDX46Q7L014 1031 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 KLHL34Q8N239 644 aa21.83■■□□□ 1.09
CHGA-202ENST00000334654 KLHDC4Q8TBB5 520 aa21.83■■□□□ 1.09
CHGA-202ENST00000334654 RBM17Q96I25 401 aaKnown RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 ZNF594Q96JF6 807 aaPredicted RBP21.83■■□□□ 1.09
CHGA-202ENST00000334654 ANKRD18BA2A2Z9 1011 aa21.83■■□□□ 1.08
CHGA-202ENST00000334654 CCDC57Q2TAC2 916 aa21.83■■□□□ 1.08
CHGA-202ENST00000334654 SLX4Q8IY92 1834 aa21.83■■□□□ 1.08
CHGA-202ENST00000334654 CACNA1SQ13698 1873 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 SPEF2Q9C093 1822 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 GRAPQ13588 217 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 GRAPLQ8TC17 118 aaPredicted RBP21.82■■□□□ 1.08
CHGA-202ENST00000334654 SYT17Q9BSW7 474 aa21.82■■□□□ 1.08
CHGA-202ENST00000334654 PA2G4Q9UQ80 394 aaKnown RBP21.82■■□□□ 1.08
CHGA-202ENST00000334654 RPS8P62241 208 aaKnown RBP21.81■■□□□ 1.08
CHGA-202ENST00000334654 ZNF622Q969S3 477 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHGA-202ENST00000334654 COPRSQ9NQ92 184 aa21.81■■□□□ 1.08
CHGA-202ENST00000334654 ERICH6BQ5W0A0 696 aa21.8■■□□□ 1.08
CHGA-202ENST00000334654 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
CHGA-202ENST00000334654 PUS3Q9BZE2 481 aaKnown RBP21.8■■□□□ 1.08
CHGA-202ENST00000334654 ALDH1B1P30837 517 aa21.79■■□□□ 1.08
CHGA-202ENST00000334654 CDC5LQ99459 802 aaKnown RBP21.79■■□□□ 1.08
CHGA-202ENST00000334654 IGHDP01880 384 aa21.78■■□□□ 1.08
CHGA-202ENST00000334654 HDAC1Q13547 482 aaPredicted RBP21.78■■□□□ 1.08
CHGA-202ENST00000334654 ANKRD18AQ8IVF6 992 aa21.78■■□□□ 1.08
CHGA-202ENST00000334654 CNKSR1Q969H4 720 aa21.78■■□□□ 1.08
CHGA-202ENST00000334654 NOP58Q9Y2X3 529 aaKnown RBP21.78■■□□□ 1.08
CHGA-202ENST00000334654 BBOX1O75936 387 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 LRRC24Q50LG9 513 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 ATG9AQ7Z3C6 839 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 C7orf43Q8WVR3 580 aa21.77■■□□□ 1.08
CHGA-202ENST00000334654 BSDC1Q9NW68 430 aaPredicted RBP21.77■■□□□ 1.08
CHGA-202ENST00000334654 HMMRO75330 724 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 PRPF40BQ6NWY9 871 aaKnown RBP21.77■■□□□ 1.07
CHGA-202ENST00000334654 TTLL6Q8N841 843 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 PIM2Q9P1W9 311 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 RIPOR2Q9Y4F9 1068 aa21.77■■□□□ 1.07
CHGA-202ENST00000334654 LDHAL6AQ6ZMR3 332 aa21.76■■□□□ 1.07
CHGA-202ENST00000334654 LRRC37AA6NMS7 1700 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 EYA2O00167 538 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 IGHMBP2P38935 993 aaKnown RBP21.75■■□□□ 1.07
CHGA-202ENST00000334654 TAF7LQ5H9L4 462 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 SIL1Q9H173 461 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 DCTPP1Q9H773 170 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 FBXO3Q9UK99 471 aa21.75■■□□□ 1.07
CHGA-202ENST00000334654 A0A1B0GUL6 1792 aa21.74■■□□□ 1.07
CHGA-202ENST00000334654 PPEF1O14829 653 aaPredicted RBP21.74■■□□□ 1.07
CHGA-202ENST00000334654 SURF6O75683 361 aaKnown RBP21.74■■□□□ 1.07
CHGA-202ENST00000334654 CIAO1O76071 339 aa21.74■■□□□ 1.07
CHGA-202ENST00000334654 MPHOSPH8Q99549 860 aa21.74■■□□□ 1.07
CHGA-202ENST00000334654 OLFM4Q6UX06 510 aa21.73■■□□□ 1.07
CHGA-202ENST00000334654 MINPP1Q9UNW1 487 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms