RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RIPPLY1Q0D2K3 151 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 TRAF5O00463 557 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 DDX10Q13206 875 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 STX3Q13277 289 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 SPECC1Q5M775 1068 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 FAM129AQ9BZQ8 928 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 DRC3Q9H069 523 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 IGF1RP08069 1367 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 DDHD2O94830 711 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 CCT6AP40227 531 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 C17orf50Q8WW18 174 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 TRIM7Q9C029 511 aa6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 FBXO2Q9UK22 296 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 CTDP1Q9Y5B0 961 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-201ENST00000334218 PCK1P35558 622 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 LIG3P49916 1009 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 SFSWAPQ12872 951 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 RASEFQ8IZ41 740 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 MAGI1Q96QZ7 1491 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 DNMBPQ6XZF7 1577 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 SASH1O94885 1247 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 KRT75O95678 551 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 FAM161AQ3B820 660 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 DISC1Q9NRI5 854 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 FOXD4L1Q9NU39 408 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 MBD2Q9UBB5 411 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 MARCH6O60337 910 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 KRT6AP02538 564 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 KRT6BP04259 564 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 KRT6CP48668 564 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 FOXD1Q16676 465 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 ARFGAP3Q9NP61 516 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 UBAP1Q9NZ09 502 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 FRMD3A2A2Y4 597 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 NOP56O00567 594 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 CETN3O15182 167 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 C4BPBP20851 252 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 RGS3P49796 1198 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 CEP85LQ5SZL2 805 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 LRRC59Q96AG4 307 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 MPHOSPH8Q99549 860 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 UBE2OQ9C0C9 1292 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 CNGB3Q9NQW8 809 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 ANGPTL3Q9Y5C1 460 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 HNRNPCP07910 306 aaKnown RBP eCLIP6.9□□□□□ -1.35e-6■■■□□ 16.4
CDC42BPA-201ENST00000334218 VCAM1P19320 739 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 ANKRD35Q8N283 1001 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 CFAP36Q96G28 342 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 PPP1R9AQ9ULJ8 1098 aa6.9□□□□□ -1.3
CDC42BPA-201ENST00000334218 PEG3Q9GZU2 1588 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 IPO8O15397 1037 aaKnown RBP6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 GNL1P36915 607 aaPredicted RBP6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 COPB2P35606 906 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 USP5P45974 858 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 TAOK1Q7L7X3 1001 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 USP37Q86T82 979 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 GATAD2AQ86YP4 633 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 GTF2F1P35269 517 aaKnown RBP eCLIP6.9□□□□□ -1.313e-27■■■■■ 35.2
CDC42BPA-201ENST00000334218 FOXD4L5Q5VV16 416 aaPredicted RBP6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 KIF6Q6ZMV9 814 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 FAM186BQ8IYM0 893 aa6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.31
CDC42BPA-201ENST00000334218 BICDL2A1A5D9 508 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC170Q8IYT3 715 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 ANKRD30AQ9BXX3 1397 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 WASHC2CQ9Y4E1 1318 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 S100A9P06702 114 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 MCM2P49736 904 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 HDXQ7Z353 690 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 TCP11Q8WWU5 503 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 ATP6V0A1Q93050 837 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 RAB3IPQ96QF0 476 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 PHBP35232 272 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 CBX1P83916 185 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 SPAG5Q96R06 1193 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 DACH1Q9UI36 760 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 NEK2P51955 445 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 SNX16P57768 344 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 CARD11Q9BXL7 1154 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 FAF1Q9UNN5 650 aaPredicted RBP6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 EIF2S1P05198 315 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 MAML3Q96JK9 1138 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 COBLO75128 1261 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 ARHGAP18Q8N392 663 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZNF148Q9UQR1 794 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 TSPAN9O75954 239 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 MXRA7P84157 204 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 DNAJC25Q9H1X3 360 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 RBM27Q9P2N5 1060 aaKnown RBP6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 DMRT2Q9Y5R5 561 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 SESN1Q9Y6P5 492 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 SYNJ2O15056 1496 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 CENPKQ9BS16 269 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 NDE1Q9NXR1 346 aa6.89□□□□□ -1.31
CDC42BPA-201ENST00000334218 TUBA1BP68363 451 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC129Q6ZRS4 1044 aa6.88□□□□□ -1.31
CDC42BPA-201ENST00000334218 TUBA1AQ71U36 451 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms