RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 MICU3Q86XE3 530 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 EHBP1Q8NDI1 1231 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 TTC14Q96N46 770 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 PPP1R12CQ9BZL4 782 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 ARFGAP3Q9NP61 516 aa18.66■□□□□ 0.58
PTCH1-201ENST00000331920 STAT6P42226 847 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 CASQ2O14958 399 aaPredicted RBP18.65■□□□□ 0.58
PTCH1-201ENST00000331920 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 CCDC89Q8N998 374 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 ZNF830Q96NB3 372 aaPredicted RBP18.65■□□□□ 0.58
PTCH1-201ENST00000331920 SLC26A6Q9BXS9 759 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 VPS18Q9P253 973 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 RPGRIP1LQ68CZ1 1315 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 UBASH3AP57075 661 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
PTCH1-201ENST00000331920 CCDC8Q9H0W5 538 aaPredicted RBP18.65■□□□□ 0.58
PTCH1-201ENST00000331920 TACC1O75410 805 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 IVLP07476 585 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 MVPQ14764 893 aaKnown RBP18.65■□□□□ 0.58
PTCH1-201ENST00000331920 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 UBLCP1Q8WVY7 318 aaPredicted RBP18.65■□□□□ 0.58
PTCH1-201ENST00000331920 ANKFY1Q9P2R3 1169 aa18.65■□□□□ 0.58
PTCH1-201ENST00000331920 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.64■□□□□ 0.58
PTCH1-201ENST00000331920 TDRD9Q8NDG6 1382 aaKnown RBP18.64■□□□□ 0.58
PTCH1-201ENST00000331920 CAPN2P17655 700 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 TXNDC2Q86VQ3 553 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 FAM13AO94988 1023 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 CCDC117Q8IWD4 279 aaPredicted RBP18.64■□□□□ 0.57
PTCH1-201ENST00000331920 IRX3P78415 501 aaPredicted RBP18.64■□□□□ 0.57
PTCH1-201ENST00000331920 IMPG2Q9BZV3 1241 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
PTCH1-201ENST00000331920 GOLGA6L9A6NEM1 432 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 HAND2P61296 217 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 PRDM11Q9NQV5 511 aa18.64■□□□□ 0.57
PTCH1-201ENST00000331920 RSRC1Q96IZ7 334 aaKnown RBP18.63■□□□□ 0.57
PTCH1-201ENST00000331920 ZBTB21Q9ULJ3 1066 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 CALM1P0DP23 149 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 CALM2P0DP24 149 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 CALM3P0DP25 149 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 SLF2Q8IX21 1173 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 PRAM1Q96QH2 718 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 ATP11AP98196 1134 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 CTAGE9A4FU28 777 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 IFIT5Q13325 482 aaKnown RBP18.63■□□□□ 0.57
PTCH1-201ENST00000331920 OPA1O60313 960 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 ATP2A2P16615 1042 aaKnown RBP18.63■□□□□ 0.57
PTCH1-201ENST00000331920 GKAP1Q5VSY0 366 aaPredicted RBP18.63■□□□□ 0.57
PTCH1-201ENST00000331920 CCDC110Q8TBZ0 833 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 TBC1D31Q96DN5 1066 aa18.63■□□□□ 0.57
PTCH1-201ENST00000331920 RFX1P22670 979 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 GJB2P29033 226 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 SETDB1Q15047 1291 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 RRAGBQ5VZM2 374 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 FMNL3Q8IVF7 1028 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 KIAA1524Q8TCG1 905 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 AGTPBP1Q9UPW5 1226 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 NCBP1Q09161 790 aaKnown RBP18.62■□□□□ 0.57
PTCH1-201ENST00000331920 E7EVH7 732 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
PTCH1-201ENST00000331920 PCK1P35558 622 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 AFG3L2Q9Y4W6 797 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 INTS8Q75QN2 995 aaKnown RBP18.61■□□□□ 0.57
PTCH1-201ENST00000331920 SAMD15Q9P1V8 674 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 SDCCAG8Q86SQ7 713 aaPredicted RBP18.61■□□□□ 0.57
PTCH1-201ENST00000331920 ATXN8OSP0DMR3 200 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 KIF1BPQ96EK5 621 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 RABGAP1Q9Y3P9 1069 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 KIFC2Q96AC6 838 aa18.61■□□□□ 0.57
PTCH1-201ENST00000331920 CACYBPQ9HB71 228 aaKnown RBP18.61■□□□□ 0.57
PTCH1-201ENST00000331920 ZNF853P0CG23 659 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 SH2D4BQ5SQS7 431 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 RNF41Q9H4P4 317 aaPredicted RBP18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CTAGE15A4D2H0 777 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 VIMP08670 466 aaKnown RBP18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CTAGE8P0CG41 777 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 ALDH3A1P30838 453 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CTAGE6Q86UF2 777 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CTAGE4Q8IX94 777 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 KRT222Q8N1A0 295 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 TXNDC9O14530 226 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CYLC1P35663 651 aaPredicted RBP18.6■□□□□ 0.57
PTCH1-201ENST00000331920 TMOD3Q9NYL9 352 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 ZNF622Q969S3 477 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTCH1-201ENST00000331920 ATP6V0A2Q9Y487 856 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CCDC171Q6TFL3 1326 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 LACTBP83111 547 aaPredicted RBP18.6■□□□□ 0.57
PTCH1-201ENST00000331920 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CLEC11AQ9Y240 323 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 NEMFO60524 1076 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 HMGB1P09429 215 aaKnown RBP18.6■□□□□ 0.57
PTCH1-201ENST00000331920 METAP2P50579 478 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTCH1-201ENST00000331920 VCX3BQ9H321 246 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 MX1P20591 662 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 C10orf67Q8IYJ2 551 aa18.6■□□□□ 0.57
PTCH1-201ENST00000331920 CDK19Q9BWU1 502 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 ZC3H6P61129 1189 aaKnown RBP18.59■□□□□ 0.57
PTCH1-201ENST00000331920 GBP6Q6ZN66 633 aa18.59■□□□□ 0.57
PTCH1-201ENST00000331920 GSDMBQ8TAX9 411 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms