RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 GRAPQ13588 217 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 CRY2Q49AN0 593 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 PRR5LQ6MZQ0 368 aa6.41□□□□□ -1.38
LRIT3-201ENST00000327908 PELP1Q8IZL8 1130 aaKnown RBP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 GRAPLQ8TC17 118 aaPredicted RBP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 SRP68Q9UHB9 627 aaKnown RBP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 DDX60Q8IY21 1712 aaKnown RBP6.41□□□□□ -1.38
LRIT3-201ENST00000327908 SUSD4Q5VX71 490 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 C2CD5Q86YS7 1000 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 ATP2B4P23634 1241 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 HLFQ16534 295 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 UBE3BQ7Z3V4 1068 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 MPHOSPH8Q99549 860 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 BCL2L13Q9BXK5 485 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 COPRSQ9NQ92 184 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 ZBTB40Q9NUA8 1239 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 LEMD3Q9Y2U8 911 aa6.4□□□□□ -1.38
LRIT3-201ENST00000327908 LTBP3Q9NS15 1303 aa6.4□□□□□ -1.39
LRIT3-201ENST00000327908 ZBTB7BO15156 539 aaPredicted RBP6.4□□□□□ -1.39
LRIT3-201ENST00000327908 ANXA1P04083 346 aa6.4□□□□□ -1.39
LRIT3-201ENST00000327908 GPTP24298 496 aa6.4□□□□□ -1.39
LRIT3-201ENST00000327908 PIM2Q9P1W9 311 aa6.4□□□□□ -1.39
LRIT3-201ENST00000327908 CASP7P55210 303 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 CCDC93Q567U6 631 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 SP8Q8IXZ3 490 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 TTLL6Q8N841 843 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 USP44Q9H0E7 712 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 GNL3LQ9NVN8 582 aaKnown RBP6.39□□□□□ -1.39
LRIT3-201ENST00000327908 PPP4R2Q9NY27 417 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 NOP58Q9Y2X3 529 aaKnown RBP6.39□□□□□ -1.39
LRIT3-201ENST00000327908 UBN2Q6ZU65 1347 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 C15orf52Q6ZUT6 534 aaKnown RBP6.39□□□□□ -1.39
LRIT3-201ENST00000327908 SSH3Q8TE77 659 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 BSDC1Q9NW68 430 aaPredicted RBP6.39□□□□□ -1.39
LRIT3-201ENST00000327908 SUPT16HQ9Y5B9 1047 aaKnown RBP6.39□□□□□ -1.39
LRIT3-201ENST00000327908 F6X3S4 739 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 SEMA3EO15041 775 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 DDR1Q08345 913 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 DALRD3Q5D0E6 543 aaKnown RBP6.39□□□□□ -1.39
LRIT3-201ENST00000327908 CENPQQ7L2Z9 268 aaPredicted RBP6.39□□□□□ -1.39
LRIT3-201ENST00000327908 KIF1BPQ96EK5 621 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 AOX1Q06278 1338 aa6.39□□□□□ -1.39
LRIT3-201ENST00000327908 IFIT1P09914 478 aaKnown RBP6.38□□□□□ -1.39
LRIT3-201ENST00000327908 OS9Q13438 667 aaPredicted RBP6.38□□□□□ -1.39
LRIT3-201ENST00000327908 UBE4AQ14139 1066 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 POLA2Q14181 598 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 BICDL1Q6ZP65 573 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 CERS3Q8IU89 383 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 TCERG1O14776 1098 aaKnown RBP6.38□□□□□ -1.39
LRIT3-201ENST00000327908 SLC5A1P13866 664 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 RPS8P62241 208 aaKnown RBP6.38□□□□□ -1.39
LRIT3-201ENST00000327908 ERFEQ4G0M1 354 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 SGIP1Q9BQI5 828 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 CEP126Q9P2H0 1117 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 XDHP47989 1333 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 LRRC37AA6NMS7 1700 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 PPEF1O14829 653 aaPredicted RBP6.38□□□□□ -1.39
LRIT3-201ENST00000327908 UQCRFS1P1P0C7P4 283 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 TTLL11Q8NHH1 800 aa6.38□□□□□ -1.39
LRIT3-201ENST00000327908 PDS5AQ29RF7 1337 aaKnown RBP6.38□□□□□ -1.39
LRIT3-201ENST00000327908 EYA2O00167 538 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 SRGNP10124 158 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 CWF19L2Q2TBE0 894 aaKnown RBP6.37□□□□□ -1.39
LRIT3-201ENST00000327908 ZGPATQ8N5A5 531 aaKnown RBP6.37□□□□□ -1.39
LRIT3-201ENST00000327908 PANK1Q8TE04 598 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 SUCLG2Q96I99 432 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 CNNM1Q9NRU3 951 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 PODXL2Q9NZ53 605 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 CHMP3Q9Y3E7 222 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 ATP6V0A2Q9Y487 856 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 LRRFIP2Q9Y608 721 aaKnown RBP6.37□□□□□ -1.39
LRIT3-201ENST00000327908 KCNJ4P48050 445 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 LMBR1LQ6UX01 489 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 CRBNQ96SW2 442 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 PSMD1Q99460 953 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 SRGAP3O43295 1099 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 MAP4K4O95819 1239 aaPredicted RBP6.37□□□□□ -1.39
LRIT3-201ENST00000327908 KCNQ4P56696 695 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 FOXO4P98177 505 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 CEP85Q6P2H3 762 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.37□□□□□ -1.39
LRIT3-201ENST00000327908 MEIS3Q99687 375 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 TAOK2Q9UL54 1235 aa6.37□□□□□ -1.39
LRIT3-201ENST00000327908 ARFGEF1Q9Y6D6 1849 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 ERC2O15083 957 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 ZBTB7AO95365 584 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 ITGA6P23229 1130 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 CLASRPQ8N2M8 674 aaKnown RBP6.36□□□□□ -1.39
LRIT3-201ENST00000327908 FAM89AQ96GI7 184 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 BICC1Q9H694 974 aaKnown RBP6.36□□□□□ -1.39
LRIT3-201ENST00000327908 MAST3O60307 1309 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 MYO3BQ8WXR4 1341 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 PTGER2P43116 358 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 PIP4K2AP48426 406 aaPredicted RBP6.36□□□□□ -1.39
LRIT3-201ENST00000327908 FKBP1AP62942 108 aaKnown RBP6.36□□□□□ -1.39
LRIT3-201ENST00000327908 PUM3Q15397 648 aaKnown RBP6.36□□□□□ -1.39
LRIT3-201ENST00000327908 ZNF804AQ7Z570 1209 aa6.36□□□□□ -1.39
LRIT3-201ENST00000327908 SLF2Q8IX21 1173 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms