RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZNF396Q96N95 335 aaPredicted RBP17.81■□□□□ 0.44
VARS2-201ENST00000321897 DNAJC25Q9H1X3 360 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 RAI14Q9P0K7 980 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 ANO6Q4KMQ2 910 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 ZSWIM4Q9H7M6 989 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 JAK2O60674 1132 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 KRT222Q8N1A0 295 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 PCMTD1Q96MG8 357 aaPredicted RBP17.8■□□□□ 0.44
VARS2-201ENST00000321897 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
VARS2-201ENST00000321897 CFAP45Q9UL16 551 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 E9PCH4 1651 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 C8orf76Q96K31 380 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 TIGD1Q96MW7 591 aa17.8■□□□□ 0.44
VARS2-201ENST00000321897 TAF3Q5VWG9 929 aa17.79■□□□□ 0.44
VARS2-201ENST00000321897 TMCO3Q6UWJ1 677 aa17.79■□□□□ 0.44
VARS2-201ENST00000321897 DHX37Q8IY37 1157 aaKnown RBP17.79■□□□□ 0.44
VARS2-201ENST00000321897 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
VARS2-201ENST00000321897 CROCC2H7BZ55 1655 aa17.79■□□□□ 0.44
VARS2-201ENST00000321897 KLHL10Q6JEL2 608 aa17.79■□□□□ 0.44
VARS2-201ENST00000321897 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
VARS2-201ENST00000321897 SCAND2PQ9GZW5 306 aaPredicted RBP17.79■□□□□ 0.44
VARS2-201ENST00000321897 NAT10Q9H0A0 1025 aaKnown RBP17.79■□□□□ 0.44
VARS2-201ENST00000321897 MADDQ8WXG6 1647 aa17.79■□□□□ 0.44
VARS2-201ENST00000321897 UVSSAQ2YD98 709 aa17.78■□□□□ 0.44
VARS2-201ENST00000321897 NOC3LQ8WTT2 800 aaKnown RBP17.78■□□□□ 0.44
VARS2-201ENST00000321897 MARCKSP29966 332 aaPredicted RBP17.78■□□□□ 0.44
VARS2-201ENST00000321897 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
VARS2-201ENST00000321897 CCDC171Q6TFL3 1326 aa17.78■□□□□ 0.44
VARS2-201ENST00000321897 TERF1P54274 439 aa17.78■□□□□ 0.44
VARS2-201ENST00000321897 ANAPC15P60006 121 aa17.78■□□□□ 0.44
VARS2-201ENST00000321897 NOL10Q9BSC4 688 aaKnown RBP17.78■□□□□ 0.44
VARS2-201ENST00000321897 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.78■□□□□ 0.442e-8■■■■■ 49.9
VARS2-201ENST00000321897 DDX21Q9NR30 783 aaKnown RBP eCLIP17.78■□□□□ 0.44
VARS2-201ENST00000321897 CALCOCO1Q9P1Z2 691 aa17.78■□□□□ 0.44
VARS2-201ENST00000321897 MAP3K4Q9Y6R4 1608 aa17.78■□□□□ 0.44
VARS2-201ENST00000321897 ZNF213O14771 459 aa17.77■□□□□ 0.44
VARS2-201ENST00000321897 ORC3Q9UBD5 711 aaPredicted RBP17.77■□□□□ 0.44
VARS2-201ENST00000321897 JAG2Q9Y219 1238 aa17.77■□□□□ 0.44
VARS2-201ENST00000321897 TSPOAP1O95153 1857 aa17.77■□□□□ 0.44
VARS2-201ENST00000321897 A0A087WWV3 80 aa17.77■□□□□ 0.44
VARS2-201ENST00000321897 A0A0D9SFI3 127 aa17.77■□□□□ 0.44
VARS2-201ENST00000321897 CCDC69A6NI79 296 aa17.77■□□□□ 0.44
VARS2-201ENST00000321897 LEKR1Q6ZMV7 388 aa17.77■□□□□ 0.43
VARS2-201ENST00000321897 CWC15Q9P013 229 aaKnown RBP17.77■□□□□ 0.43
VARS2-201ENST00000321897 KIF1BO60333 1816 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 KLF18A0A0U1RQI7 1052 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 IBSPP21815 317 aaPredicted RBP17.76■□□□□ 0.43
VARS2-201ENST00000321897 LRMPQ12912 555 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 EFCAB6Q5THR3 1501 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 ALDH1L1O75891 902 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 CCAR1Q8IX12 1150 aaKnown RBP17.76■□□□□ 0.43
VARS2-201ENST00000321897 STARD3NLO95772 234 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 SKILP12757 684 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 CEP57L1Q8IYX8 460 aa17.76■□□□□ 0.43
VARS2-201ENST00000321897 GIGYF1O75420 1035 aaPredicted RBP17.75■□□□□ 0.43
VARS2-201ENST00000321897 KIF20AO95235 890 aa17.75■□□□□ 0.43
VARS2-201ENST00000321897 OLFM4Q6UX06 510 aa17.75■□□□□ 0.43
VARS2-201ENST00000321897 SFPQP23246 707 aaKnown RBP eCLIP17.75■□□□□ 0.43
VARS2-201ENST00000321897 NAPBQ9H115 298 aa17.75■□□□□ 0.43
VARS2-201ENST00000321897 PATL2C9JE40 543 aaKnown RBP17.75■□□□□ 0.43
VARS2-201ENST00000321897 FAM200AQ8TCP9 573 aa17.75■□□□□ 0.43
VARS2-201ENST00000321897 UNC13BO14795 1591 aa17.75■□□□□ 0.43
VARS2-201ENST00000321897 ABCC3O15438 1527 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
VARS2-201ENST00000321897 ME3Q16798 604 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 CFAP100Q494V2 611 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 ZCRB1Q8TBF4 217 aaKnown RBP17.74■□□□□ 0.43
VARS2-201ENST00000321897 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 ABCA6Q8N139 1617 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 BEND3Q5T5X7 828 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 SSH3Q8TE77 659 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 KIF2CQ99661 725 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 RAD50Q92878 1312 aa17.74■□□□□ 0.43
VARS2-201ENST00000321897 FAM135BQ49AJ0 1406 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 SLC27A2O14975 620 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 MCMDC2Q4G0Z9 681 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 PYCARDQ9ULZ3 195 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 RNF17Q9BXT8 1623 aaKnown RBP17.73■□□□□ 0.43
VARS2-201ENST00000321897 MLH3Q9UHC1 1453 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 ATP2B2Q01814 1243 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 TYRO3Q06418 890 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 PAG1Q9NWQ8 432 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 PLXNC1O60486 1568 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 LARGE1O95461 756 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 HSPA4P34932 840 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 DMTNQ08495 405 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 NOM1Q5C9Z4 860 aaKnown RBP17.73■□□□□ 0.43
VARS2-201ENST00000321897 CTNNA3Q9UI47 895 aa17.73■□□□□ 0.43
VARS2-201ENST00000321897 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 CCDC102AQ96A19 550 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 ZKSCAN3Q9BRR0 538 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
VARS2-201ENST00000321897 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
VARS2-201ENST00000321897 SLC9C2Q5TAH2 1124 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 AK7Q96M32 723 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 UBAC1Q9BSL1 405 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 LMAN1P49257 510 aa17.72■□□□□ 0.43
VARS2-201ENST00000321897 DHX8Q14562 1220 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms