RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 GRM8O00222 908 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 MYZAPP0CAP1 466 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 WDR78Q5VTH9 848 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ANKRD24Q8TF21 1146 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ZNF622Q969S3 477 aaKnown RBP eCLIP3.67□□□□□ -1.823e-6■■□□□ 12.3
CLOCK-201ENST00000309964 SPATA32Q96LK8 384 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TPCN1Q9ULQ1 816 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 K7ELQ4 463 aaPredicted RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 IGSF3O75054 1194 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TSPY3P0CV98 308 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TSPY8P0CW00 308 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 MX1P20591 662 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 SLC4A3P48751 1232 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TRAPPC3LQ5T215 181 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TNMDQ9H2S6 317 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ARHGEF10LQ9HCE6 1279 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ANO10Q9NW15 660 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TFCP2L1Q9NZI6 479 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 EDC4Q6P2E9 1401 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 H0YIN7 160 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 EIF5P55010 431 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 SSRP1Q08945 709 aaKnown RBP3.67□□□□□ -1.82
CLOCK-201ENST00000309964 KIF4BQ2VIQ3 1234 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 ZHX3Q9H4I2 956 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 USP25Q9UHP3 1055 aa3.67□□□□□ -1.82
CLOCK-201ENST00000309964 TTC41PQ6P2S7 1318 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 MINDY4BA8MYZ0 360 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 BBXQ8WY36 941 aaPredicted RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 NPC1L1Q9UHC9 1359 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 GOLGA6L10A0A0M3HER8 536 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 ZBTB24O43167 697 aaPredicted RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 TUBBP07437 444 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 USP8P40818 1118 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 NASPP49321 788 aaPredicted RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 RRS1Q15050 365 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 LZTS2Q9BRK4 669 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 PICK1Q9NRD5 415 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 RBM28Q9NW13 759 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 FBXO3Q9UK99 471 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 DENND2AQ9ULE3 1009 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 NOC2LQ9Y3T9 749 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 LRRFIP2Q9Y608 721 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 LAMC1P11047 1609 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 CC2D2BQ6DHV5 1058 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 TAF4BQ92750 862 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 RBM17Q96I25 401 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 ECHDC1Q9NTX5 307 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 PDRG1Q9NUG6 133 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC87Q9NVE4 849 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 IVNS1ABPQ9Y6Y0 642 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 SLU7O95391 586 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 GSDMDP57764 484 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 SPAG1Q07617 926 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC96Q2M329 555 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 EXOC8Q8IYI6 725 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 TEKT1Q969V4 418 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 IARSP41252 1262 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 TCIRG1Q13488 830 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 CLUL1Q15846 466 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 ELMSAN1Q6PJG2 1045 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 BLMP54132 1417 aaPredicted RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 IFIT3O14879 490 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 GAS8O95995 478 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 STX8Q9UNK0 236 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 KDM6BO15054 1643 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 LINS1Q8NG48 757 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 TBC1D5Q92609 795 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 JAKMIP2Q96AA8 810 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 UPF3BQ9BZI7 483 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.66□□□□□ -1.825e-7■■■■□ 22.4
CLOCK-201ENST00000309964 THRAP3Q9Y2W1 955 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 SAMD9Q5K651 1589 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC66A2RUB6 948 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 H7C1D1 291 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 PAFAH1B1P43034 410 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 NLRP5P59047 1200 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 MAP3K11Q16584 847 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 IFIT1BQ5T764 474 aaKnown RBP3.66□□□□□ -1.82
CLOCK-201ENST00000309964 DCAF15Q66K64 600 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 IWS1Q96ST2 819 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 AS3MTQ9HBK9 375 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 ERBB4Q15303 1308 aa3.66□□□□□ -1.82
CLOCK-201ENST00000309964 ARAP3Q8WWN8 1544 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 PREX2Q70Z35 1606 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 HS2ST1Q7LGA3 356 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 WAPLQ7Z5K2 1190 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 PDILTQ8N807 584 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 CCDC97Q96F63 343 aaPredicted RBP3.65□□□□□ -1.82
CLOCK-201ENST00000309964 SIL1Q9H173 461 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 GPHNQ9NQX3 736 aaPredicted RBP3.65□□□□□ -1.82
CLOCK-201ENST00000309964 POLR3GO15318 223 aaPredicted RBP3.65□□□□□ -1.82
CLOCK-201ENST00000309964 CNPY4Q8N129 248 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 SAMM50Q9Y512 469 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 CEP170Q5SW79 1584 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 RTL9Q8NET4 1388 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 RAD50Q92878 1312 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 ATP2A1O14983 1001 aa3.65□□□□□ -1.82
CLOCK-201ENST00000309964 RANBP6O60518 1105 aaKnown RBP3.65□□□□□ -1.82
CLOCK-201ENST00000309964 GCP02774 474 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms