RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 EDC3Q96F86 508 aaKnown RBP27.6■■■□□ 2.01
VSTM4-201ENST00000298454 IFIT5Q13325 482 aaKnown RBP27.6■■■□□ 2.01
VSTM4-201ENST00000298454 LINC00116Q8NCU8 138 aa27.6■■■□□ 2.01
VSTM4-201ENST00000298454 TTLL11Q8NHH1 800 aa27.6■■■□□ 2.01
VSTM4-201ENST00000298454 NEUROD6Q96NK8 337 aa27.6■■■□□ 2.01
VSTM4-201ENST00000298454 LSG1Q9H089 658 aaKnown RBP27.6■■■□□ 2.01
VSTM4-201ENST00000298454 GPR108Q9NPR9 543 aa27.6■■■□□ 2.01
VSTM4-201ENST00000298454 EPB41L2O43491 1005 aaKnown RBP27.59■■■□□ 2.01
VSTM4-201ENST00000298454 CTSWP56202 376 aa27.59■■■□□ 2.01
VSTM4-201ENST00000298454 RUFY2Q8WXA3 655 aa27.59■■■□□ 2.01
VSTM4-201ENST00000298454 GREM2Q9H772 168 aa27.59■■■□□ 2.01
VSTM4-201ENST00000298454 RAD50Q92878 1312 aa27.58■■■□□ 2.01
VSTM4-201ENST00000298454 FSD1Q9BTV5 496 aa27.58■■■□□ 2.01
VSTM4-201ENST00000298454 NDUFB9Q9Y6M9 179 aa27.58■■■□□ 2.01
VSTM4-201ENST00000298454 TAF7LQ5H9L4 462 aa27.58■■■□□ 2
VSTM4-201ENST00000298454 SUSD4Q5VX71 490 aa27.58■■■□□ 2
VSTM4-201ENST00000298454 HSPA4P34932 840 aa27.57■■■□□ 2
VSTM4-201ENST00000298454 ANAPC15P60006 121 aa27.57■■■□□ 2
VSTM4-201ENST00000298454 FAM227BQ96M60 508 aa27.57■■■□□ 2
VSTM4-201ENST00000298454 FOXD4L1Q9NU39 408 aa27.57■■■□□ 2
VSTM4-201ENST00000298454 COL5A3P25940 1745 aaPredicted RBP27.57■■■□□ 2
VSTM4-201ENST00000298454 ST18O60284 1047 aa27.56■■■□□ 2
VSTM4-201ENST00000298454 FRAT2O75474 233 aaPredicted RBP27.56■■■□□ 2
VSTM4-201ENST00000298454 ITGA6P23229 1130 aa27.56■■■□□ 2
VSTM4-201ENST00000298454 KIAA1211Q6ZU35 1233 aa27.56■■■□□ 2
VSTM4-201ENST00000298454 FAM177BA6PVY3 158 aa27.56■■■□□ 2
VSTM4-201ENST00000298454 CEP126Q9P2H0 1117 aa27.56■■■□□ 2
VSTM4-201ENST00000298454 ZNF609O15014 1411 aa27.56■■■□□ 2
VSTM4-201ENST00000298454 A0A1B0GUL7 405 aa27.55■■■□□ 2
VSTM4-201ENST00000298454 PDE8AO60658 829 aa27.55■■■□□ 2
VSTM4-201ENST00000298454 DDIT3P35638 169 aa27.55■■■□□ 2
VSTM4-201ENST00000298454 NMIQ13287 307 aaPredicted RBP27.55■■■□□ 2
VSTM4-201ENST00000298454 CHMP5Q9NZZ3 219 aa27.55■■■□□ 2
VSTM4-201ENST00000298454 FBXO3Q9UK99 471 aa27.55■■■□□ 2
VSTM4-201ENST00000298454 HIP1O00291 1037 aa27.55■■■□□ 2
VSTM4-201ENST00000298454 HSP90AA1P07900 732 aaKnown RBP27.55■■■□□ 2
VSTM4-201ENST00000298454 DNAJC2Q99543 621 aaKnown RBP27.55■■■□□ 2
VSTM4-201ENST00000298454 HAUS7Q99871 368 aa27.54■■■□□ 2
VSTM4-201ENST00000298454 NEK4P51957 841 aa27.53■■■□□ 2
VSTM4-201ENST00000298454 ZNF831Q5JPB2 1677 aa27.53■■■□□ 2
VSTM4-201ENST00000298454 PTH1RQ03431 593 aa27.53■■■□□ 2
VSTM4-201ENST00000298454 IL17RAQ96F46 866 aa27.53■■■□□ 2
VSTM4-201ENST00000298454 A0A0D9SFI3 127 aa27.52■■■□□ 2
VSTM4-201ENST00000298454 ANKRD18BA2A2Z9 1011 aa27.52■■■□□ 2
VSTM4-201ENST00000298454 NIP7Q9Y221 180 aaKnown RBP eCLIP27.52■■■□□ 2
VSTM4-201ENST00000298454 UTP14AQ9BVJ6 771 aaKnown RBP27.51■■□□□ 1.99
VSTM4-201ENST00000298454 SH3TC1Q8TE82 1336 aa27.51■■□□□ 1.99
VSTM4-201ENST00000298454 ATRNO75882 1429 aa27.5■■□□□ 1.99
VSTM4-201ENST00000298454 HCLS1P14317 486 aaPredicted RBP27.5■■□□□ 1.99
VSTM4-201ENST00000298454 LDHAL6AQ6ZMR3 332 aa27.5■■□□□ 1.99
VSTM4-201ENST00000298454 PARP10Q53GL7 1025 aa27.5■■□□□ 1.99
VSTM4-201ENST00000298454 SMIM5Q71RC9 77 aa27.5■■□□□ 1.99
VSTM4-201ENST00000298454 TRPC5Q9UL62 973 aaPredicted RBP27.5■■□□□ 1.99
VSTM4-201ENST00000298454 RIPOR2Q9Y4F9 1068 aa27.5■■□□□ 1.99
VSTM4-201ENST00000298454 BTAF1O14981 1849 aa27.5■■□□□ 1.99
VSTM4-201ENST00000298454 DDX46Q7L014 1031 aaKnown RBP27.49■■□□□ 1.99
VSTM4-201ENST00000298454 NHSQ6T4R5 1651 aa27.49■■□□□ 1.99
VSTM4-201ENST00000298454 CNTNAP4Q9C0A0 1308 aa27.49■■□□□ 1.99
VSTM4-201ENST00000298454 ONECUT3O60422 494 aaPredicted RBP27.49■■□□□ 1.99
VSTM4-201ENST00000298454 SNX14Q9Y5W7 946 aa27.49■■□□□ 1.99
VSTM4-201ENST00000298454 MYH3P11055 1940 aa27.48■■□□□ 1.99
VSTM4-201ENST00000298454 RASEFQ8IZ41 740 aa27.48■■□□□ 1.99
VSTM4-201ENST00000298454 UPF3BQ9BZI7 483 aaKnown RBP27.48■■□□□ 1.99
VSTM4-201ENST00000298454 AKAP2Q9Y2D5 859 aa27.48■■□□□ 1.99
VSTM4-201ENST00000298454 RIC1Q4ADV7 1423 aa27.48■■□□□ 1.99
VSTM4-201ENST00000298454 SEPT12Q8IYM1 358 aa27.48■■□□□ 1.99
VSTM4-201ENST00000298454 SNRKQ9NRH2 765 aa27.48■■□□□ 1.99
VSTM4-201ENST00000298454 CCDC171Q6TFL3 1326 aa27.47■■□□□ 1.99
VSTM4-201ENST00000298454 NTSR2O95665 410 aa27.47■■□□□ 1.99
VSTM4-201ENST00000298454 CHGBP05060 677 aa27.47■■□□□ 1.99
VSTM4-201ENST00000298454 ADORA1P30542 326 aa27.47■■□□□ 1.99
VSTM4-201ENST00000298454 AK7Q96M32 723 aa27.47■■□□□ 1.99
VSTM4-201ENST00000298454 CNNM1Q9NRU3 951 aa27.47■■□□□ 1.99
VSTM4-201ENST00000298454 METTL24Q5JXM2 366 aa27.46■■□□□ 1.99
VSTM4-201ENST00000298454 ZNF652Q9Y2D9 606 aa27.46■■□□□ 1.99
VSTM4-201ENST00000298454 XAGE2Q96GT9 111 aa27.46■■□□□ 1.99
VSTM4-201ENST00000298454 GOLIM4O00461 696 aa27.45■■□□□ 1.99
VSTM4-201ENST00000298454 MED23Q9ULK4 1368 aa27.45■■□□□ 1.98
VSTM4-201ENST00000298454 IFIT1P09914 478 aaKnown RBP27.45■■□□□ 1.98
VSTM4-201ENST00000298454 ZNF589Q86UQ0 364 aaPredicted RBP27.45■■□□□ 1.98
VSTM4-201ENST00000298454 PAG1Q9NWQ8 432 aa27.45■■□□□ 1.98
VSTM4-201ENST00000298454 CCNL1Q9UK58 526 aaPredicted RBP27.45■■□□□ 1.98
VSTM4-201ENST00000298454 KBTBD3Q8NAB2 608 aa27.44■■□□□ 1.98
VSTM4-201ENST00000298454 PRPF40BQ6NWY9 871 aaKnown RBP27.43■■□□□ 1.98
VSTM4-201ENST00000298454 CLEC4GQ6UXB4 293 aa27.43■■□□□ 1.98
VSTM4-201ENST00000298454 CIZ1Q9ULV3 898 aaPredicted RBP27.43■■□□□ 1.98
VSTM4-201ENST00000298454 BCORQ6W2J9 1755 aa27.43■■□□□ 1.98
VSTM4-201ENST00000298454 RFX7Q2KHR2 1363 aa27.43■■□□□ 1.98
VSTM4-201ENST00000298454 MAP4K1Q92918 833 aa27.43■■□□□ 1.98
VSTM4-201ENST00000298454 NECTIN1Q15223 517 aa27.42■■□□□ 1.98
VSTM4-201ENST00000298454 CCDC158Q5M9N0 1113 aa27.42■■□□□ 1.98
VSTM4-201ENST00000298454 GORABQ5T7V8 394 aa27.42■■□□□ 1.98
VSTM4-201ENST00000298454 RC3H1Q5TC82 1133 aaKnown RBP27.42■■□□□ 1.98
VSTM4-201ENST00000298454 QTRT2Q9H974 415 aaKnown RBP27.42■■□□□ 1.98
VSTM4-201ENST00000298454 RBM8AQ9Y5S9 174 aaKnown RBP27.42■■□□□ 1.98
VSTM4-201ENST00000298454 ATP2B3Q16720 1220 aa27.42■■□□□ 1.98
VSTM4-201ENST00000298454 VGLL2Q8N8G2 317 aa27.42■■□□□ 1.98
VSTM4-201ENST00000298454 MCM2P49736 904 aa27.41■■□□□ 1.98
VSTM4-201ENST00000298454 TTC39AQ5SRH9 613 aa27.41■■□□□ 1.98
VSTM4-201ENST00000298454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms