RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 CNPY4Q8N129 248 aa16.94■□□□□ 0.3
SEC16A-202ENST00000290037 ANKS4BQ8N8V4 417 aa16.94■□□□□ 0.3
SEC16A-202ENST00000290037 PNMA2Q9UL42 364 aa16.94■□□□□ 0.3
SEC16A-202ENST00000290037 RIMS2Q9UQ26 1411 aa16.94■□□□□ 0.3
SEC16A-202ENST00000290037 SYCE3A1L190 88 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 ZSCAN22P10073 491 aaPredicted RBP16.93■□□□□ 0.3
SEC16A-202ENST00000290037 TBC1D5Q92609 795 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 MSANTD4Q8NCY6 345 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 RAI14Q9P0K7 980 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 ARHGAP31Q2M1Z3 1444 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 CRNKL1Q9BZJ0 848 aaKnown RBP16.93■□□□□ 0.3
SEC16A-202ENST00000290037 MYOM2P54296 1465 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 ESR2Q92731 530 aa16.93■□□□□ 0.3
SEC16A-202ENST00000290037 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
SEC16A-202ENST00000290037 CCDC175P0C221 793 aa16.92■□□□□ 0.3
SEC16A-202ENST00000290037 PHF8Q9UPP1 1060 aa16.92■□□□□ 0.3
SEC16A-202ENST00000290037 MFSD6Q6ZSS7 791 aa16.92■□□□□ 0.3
SEC16A-202ENST00000290037 DZIP1Q86YF9 867 aaKnown RBP16.92■□□□□ 0.3
SEC16A-202ENST00000290037 GOLGA8BA8MQT2 603 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 KRI1Q8N9T8 703 aaKnown RBP16.91■□□□□ 0.3
SEC16A-202ENST00000290037 CCDC102AQ96A19 550 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 CCDC77Q9BR77 488 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 ASXL2Q76L83 1435 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 KRT222Q8N1A0 295 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 TNPO1Q92973 898 aaKnown RBP16.91■□□□□ 0.3
SEC16A-202ENST00000290037 MKNK2Q9HBH9 465 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 TBC1D9Q6ZT07 1266 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
SEC16A-202ENST00000290037 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 KIAA0232Q92628 1395 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 ATP2A1O14983 1001 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 SNW1Q13573 536 aaKnown RBP16.91■□□□□ 0.3
SEC16A-202ENST00000290037 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 NUP133Q8WUM0 1156 aa16.91■□□□□ 0.3
SEC16A-202ENST00000290037 LRRFIP2Q9Y608 721 aaKnown RBP16.91■□□□□ 0.3
SEC16A-202ENST00000290037 MAP2K1Q02750 393 aaPredicted RBP16.9■□□□□ 0.3
SEC16A-202ENST00000290037 PPP2R5EQ16537 467 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 ZNF165P49910 485 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
SEC16A-202ENST00000290037 ARFGAP3Q9NP61 516 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 TBC1D2Q9BYX2 928 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 VWA3BQ502W6 1294 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 SPC24Q8NBT2 197 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 ATP5DP30049 168 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 CCDC155Q8N6L0 562 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 SIRT1Q96EB6 747 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 IMPACTQ9P2X3 320 aa16.9■□□□□ 0.3
SEC16A-202ENST00000290037 RPGRIP1Q96KN7 1286 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
SEC16A-202ENST00000290037 USH1CQ9Y6N9 552 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 KIAA1524Q8TCG1 905 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 FERMT2Q96AC1 680 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.29
SEC16A-202ENST00000290037 CNGA4Q8IV77 575 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 MAP3K5Q99683 1374 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 PSMA7O14818 248 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 ARID4AP29374 1257 aaPredicted RBP16.89■□□□□ 0.29
SEC16A-202ENST00000290037 ARHGEF10O15013 1369 aa16.89■□□□□ 0.29
SEC16A-202ENST00000290037 KRT86O43790 486 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 DYDC1Q8WWB3 177 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 AKAP4Q5JQC9 854 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 UBA7P41226 1012 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
SEC16A-202ENST00000290037 IFFO1Q0D2I5 559 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 C10orf67Q8IYJ2 551 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 FSD2A1L4K1 749 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 METAP2P50579 478 aaKnown RBP eCLIP16.88■□□□□ 0.296e-6■■■□□ 17.4
SEC16A-202ENST00000290037 GIMAP7Q8NHV1 300 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 ARID3AQ99856 593 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 NUCKS1Q9H1E3 243 aaKnown RBP16.88■□□□□ 0.29
SEC16A-202ENST00000290037 GNA11P29992 359 aa16.88■□□□□ 0.29
SEC16A-202ENST00000290037 DISP3Q9P2K9 1392 aa16.87■□□□□ 0.29
SEC16A-202ENST00000290037 CNGA1P29973 690 aa16.87■□□□□ 0.29
SEC16A-202ENST00000290037 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
SEC16A-202ENST00000290037 PAXIP1Q6ZW49 1069 aaPredicted RBP16.87■□□□□ 0.29
SEC16A-202ENST00000290037 MRPS27Q92552 414 aaKnown RBP16.87■□□□□ 0.29
SEC16A-202ENST00000290037 MPHOSPH10O00566 681 aaKnown RBP16.87■□□□□ 0.29
SEC16A-202ENST00000290037 IDH1O75874 414 aaKnown RBP16.87■□□□□ 0.29
SEC16A-202ENST00000290037 ACTN2P35609 894 aa16.87■□□□□ 0.29
SEC16A-202ENST00000290037 MCMDC2Q4G0Z9 681 aa16.87■□□□□ 0.29
SEC16A-202ENST00000290037 GOLGA8AA7E2F4 631 aa16.87■□□□□ 0.29
SEC16A-202ENST00000290037 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
SEC16A-202ENST00000290037 CTAGE9A4FU28 777 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 FSIP1Q8NA03 581 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 GABPB2Q8TAK5 448 aaPredicted RBP16.86■□□□□ 0.29
SEC16A-202ENST00000290037 EXOC1Q9NV70 894 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 TNNT1P13805 278 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 SNX16P57768 344 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 TSKSQ9UJT2 592 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 FYB1O15117 783 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 YEATS2Q9ULM3 1422 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 IQGAP3Q86VI3 1631 aa16.86■□□□□ 0.29
SEC16A-202ENST00000290037 FCHSD1Q86WN1 690 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms