RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TTLL11Q8NHH1 800 aa25.05■■□□□ 1.6
LYSMD2-201ENST00000267838 TAF1LQ8IZX4 1826 aa25.05■■□□□ 1.6
LYSMD2-201ENST00000267838 IFIT5Q13325 482 aaKnown RBP25.05■■□□□ 1.6
LYSMD2-201ENST00000267838 LRRC24Q50LG9 513 aa25.05■■□□□ 1.6
LYSMD2-201ENST00000267838 CCDC85AQ96PX6 553 aaPredicted RBP25.05■■□□□ 1.6
LYSMD2-201ENST00000267838 UTP14AQ9BVJ6 771 aaKnown RBP25.05■■□□□ 1.6
LYSMD2-201ENST00000267838 FBXO3Q9UK99 471 aa25.05■■□□□ 1.6
LYSMD2-201ENST00000267838 CLEC4GQ6UXB4 293 aa25.04■■□□□ 1.6
LYSMD2-201ENST00000267838 GPR108Q9NPR9 543 aa25.04■■□□□ 1.6
LYSMD2-201ENST00000267838 DBNLQ9UJU6 430 aaKnown RBP25.04■■□□□ 1.6
LYSMD2-201ENST00000267838 NIP7Q9Y221 180 aaKnown RBP eCLIP25.04■■□□□ 1.6
LYSMD2-201ENST00000267838 SH3TC1Q8TE82 1336 aa25.04■■□□□ 1.6
LYSMD2-201ENST00000267838 RPS6KA4O75676 772 aa25.03■■□□□ 1.6
LYSMD2-201ENST00000267838 AK7Q96M32 723 aa25.03■■□□□ 1.6
LYSMD2-201ENST00000267838 TAF7LQ5H9L4 462 aa25.03■■□□□ 1.6
LYSMD2-201ENST00000267838 KRT27Q7Z3Y8 459 aa25.03■■□□□ 1.6
LYSMD2-201ENST00000267838 PUS3Q9BZE2 481 aaKnown RBP25.03■■□□□ 1.6
LYSMD2-201ENST00000267838 SCN7AQ01118 1682 aa25.03■■□□□ 1.6
LYSMD2-201ENST00000267838 FAM196AQ6ZSG2 479 aa25.02■■□□□ 1.6
LYSMD2-201ENST00000267838 KIF2CQ99661 725 aa25.02■■□□□ 1.6
LYSMD2-201ENST00000267838 GREM2Q9H772 168 aa25.02■■□□□ 1.6
LYSMD2-201ENST00000267838 RGL2O15211 777 aa25.01■■□□□ 1.59
LYSMD2-201ENST00000267838 GSE1Q14687 1217 aa25.01■■□□□ 1.59
LYSMD2-201ENST00000267838 ZNF772Q68DY9 489 aaPredicted RBP25.01■■□□□ 1.59
LYSMD2-201ENST00000267838 EVI5LQ96CN4 794 aa25.01■■□□□ 1.59
LYSMD2-201ENST00000267838 FAM177BA6PVY3 158 aa25■■□□□ 1.59
LYSMD2-201ENST00000267838 ITGA6P23229 1130 aa25■■□□□ 1.59
LYSMD2-201ENST00000267838 ANKRD18BA2A2Z9 1011 aa25■■□□□ 1.59
LYSMD2-201ENST00000267838 GNPATO15228 680 aa25■■□□□ 1.59
LYSMD2-201ENST00000267838 NTSR2O95665 410 aa25■■□□□ 1.59
LYSMD2-201ENST00000267838 DBNDD2Q9BQY9 259 aa25■■□□□ 1.59
LYSMD2-201ENST00000267838 TBC1D2Q9BYX2 928 aa25■■□□□ 1.59
LYSMD2-201ENST00000267838 DDX60Q8IY21 1712 aaKnown RBP24.99■■□□□ 1.59
LYSMD2-201ENST00000267838 ATP5JP18859 108 aa24.99■■□□□ 1.59
LYSMD2-201ENST00000267838 BOLA2Q9H3K6 86 aa24.99■■□□□ 1.59
LYSMD2-201ENST00000267838 LAMB2P55268 1798 aa24.99■■□□□ 1.59
LYSMD2-201ENST00000267838 ZNF609O15014 1411 aa24.99■■□□□ 1.59
LYSMD2-201ENST00000267838 C4BP0C0L5 1744 aa24.99■■□□□ 1.59
LYSMD2-201ENST00000267838 CEP126Q9P2H0 1117 aa24.98■■□□□ 1.59
LYSMD2-201ENST00000267838 NARFQ9UHQ1 456 aa24.98■■□□□ 1.59
LYSMD2-201ENST00000267838 HCLS1P14317 486 aaPredicted RBP24.98■■□□□ 1.59
LYSMD2-201ENST00000267838 RBM6P78332 1123 aaKnown RBP24.98■■□□□ 1.59
LYSMD2-201ENST00000267838 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
LYSMD2-201ENST00000267838 RTCBQ9Y3I0 505 aaKnown RBP24.98■■□□□ 1.59
LYSMD2-201ENST00000267838 HSP90B1P14625 803 aaKnown RBP24.97■■□□□ 1.59
LYSMD2-201ENST00000267838 NEUROD6Q96NK8 337 aa24.97■■□□□ 1.59
LYSMD2-201ENST00000267838 TIMM10P62072 90 aa24.95■■□□□ 1.59
LYSMD2-201ENST00000267838 BCL2L12Q9HB09 334 aa24.95■■□□□ 1.59
LYSMD2-201ENST00000267838 SGSM2O43147 1006 aa24.95■■□□□ 1.58
LYSMD2-201ENST00000267838 USPL1Q5W0Q7 1092 aa24.95■■□□□ 1.58
LYSMD2-201ENST00000267838 LDHAL6AQ6ZMR3 332 aa24.95■■□□□ 1.58
LYSMD2-201ENST00000267838 IL25Q9H293 177 aa24.95■■□□□ 1.58
LYSMD2-201ENST00000267838 ANO2Q9NQ90 1003 aa24.95■■□□□ 1.58
LYSMD2-201ENST00000267838 DIAPH3Q9NSV4 1193 aa24.95■■□□□ 1.58
LYSMD2-201ENST00000267838 AKAP2Q9Y2D5 859 aa24.95■■□□□ 1.58
LYSMD2-201ENST00000267838 A0A1B0GUL7 405 aa24.94■■□□□ 1.58
LYSMD2-201ENST00000267838 SNX21Q969T3 373 aa24.94■■□□□ 1.58
LYSMD2-201ENST00000267838 RIPOR2Q9Y4F9 1068 aa24.94■■□□□ 1.58
LYSMD2-201ENST00000267838 ZPR1O75312 459 aa24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 LRRC4BQ9NT99 713 aa24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 SRP68Q9UHB9 627 aaKnown RBP24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 RIC1Q4ADV7 1423 aa24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 LRP5O75197 1615 aa24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 EPB41L2O43491 1005 aaKnown RBP24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 TBC1D9BQ66K14 1250 aa24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 CWC27Q6UX04 472 aaKnown RBP24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 HSCBQ8IWL3 235 aa24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 RUFY2Q8WXA3 655 aa24.93■■□□□ 1.58
LYSMD2-201ENST00000267838 HIP1O00291 1037 aa24.92■■□□□ 1.58
LYSMD2-201ENST00000267838 TRIM37O94972 964 aa24.92■■□□□ 1.58
LYSMD2-201ENST00000267838 AMIGO3Q86WK7 504 aa24.92■■□□□ 1.58
LYSMD2-201ENST00000267838 ARHGEF1Q92888 912 aaKnown RBP24.92■■□□□ 1.58
LYSMD2-201ENST00000267838 CNNM1Q9NRU3 951 aa24.92■■□□□ 1.58
LYSMD2-201ENST00000267838 C4AP0C0L4 1744 aa24.91■■□□□ 1.58
LYSMD2-201ENST00000267838 METTL24Q5JXM2 366 aa24.91■■□□□ 1.58
LYSMD2-201ENST00000267838 HAUS7Q99871 368 aa24.91■■□□□ 1.58
LYSMD2-201ENST00000267838 FSD1Q9BTV5 496 aa24.91■■□□□ 1.58
LYSMD2-201ENST00000267838 RGS17Q9UGC6 210 aaPredicted RBP24.91■■□□□ 1.58
LYSMD2-201ENST00000267838 RABEP1Q15276 862 aa24.9■■□□□ 1.58
LYSMD2-201ENST00000267838 CCDC152Q4G0S7 254 aa24.9■■□□□ 1.58
LYSMD2-201ENST00000267838 BICDL1Q6ZP65 573 aa24.9■■□□□ 1.58
LYSMD2-201ENST00000267838 RTL9Q8NET4 1388 aa24.9■■□□□ 1.58
LYSMD2-201ENST00000267838 MCCP23508 829 aa24.9■■□□□ 1.58
LYSMD2-201ENST00000267838 COL24A1Q17RW2 1714 aa24.9■■□□□ 1.58
LYSMD2-201ENST00000267838 ERFEQ4G0M1 354 aa24.89■■□□□ 1.57
LYSMD2-201ENST00000267838 SLC27A3Q5K4L6 730 aa24.89■■□□□ 1.57
LYSMD2-201ENST00000267838 TRAPPC3LQ5T215 181 aa24.89■■□□□ 1.57
LYSMD2-201ENST00000267838 EDC3Q96F86 508 aaKnown RBP24.88■■□□□ 1.57
LYSMD2-201ENST00000267838 DNAJC2Q99543 621 aaKnown RBP24.88■■□□□ 1.57
LYSMD2-201ENST00000267838 SETDB2Q96T68 719 aa24.88■■□□□ 1.57
LYSMD2-201ENST00000267838 FRAT2O75474 233 aaPredicted RBP24.87■■□□□ 1.57
LYSMD2-201ENST00000267838 PHF14O94880 888 aa24.87■■□□□ 1.57
LYSMD2-201ENST00000267838 RFC4P35249 363 aa24.87■■□□□ 1.57
LYSMD2-201ENST00000267838 KIAA1211Q6ZU35 1233 aa24.87■■□□□ 1.57
LYSMD2-201ENST00000267838 VGLL2Q8N8G2 317 aa24.87■■□□□ 1.57
LYSMD2-201ENST00000267838 XAGE2Q96GT9 111 aa24.87■■□□□ 1.57
LYSMD2-201ENST00000267838 SEC31BQ9NQW1 1179 aa24.87■■□□□ 1.57
LYSMD2-201ENST00000267838 NMIQ13287 307 aaPredicted RBP24.86■■□□□ 1.57
LYSMD2-201ENST00000267838 ATP2B3Q16720 1220 aa24.86■■□□□ 1.57
LYSMD2-201ENST00000267838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms