RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ME3Q16798 604 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 EAF2Q96CJ1 260 aaPredicted RBP23.27■■□□□ 1.32
CSPG5-201ENST00000264723 U3KPZ7 1027 aaPredicted RBP23.27■■□□□ 1.32
CSPG5-201ENST00000264723 ARHGEF10O15013 1369 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 VPS53Q5VIR6 699 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 AKAP2Q9Y2D5 859 aa23.27■■□□□ 1.32
CSPG5-201ENST00000264723 SART3Q15020 963 aaKnown RBP23.26■■□□□ 1.31
CSPG5-201ENST00000264723 HELBQ8NG08 1087 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-201ENST00000264723 KIF24Q5T7B8 1368 aa23.26■■□□□ 1.31
CSPG5-201ENST00000264723 IMMTQ16891 758 aaKnown RBP23.26■■□□□ 1.31
CSPG5-201ENST00000264723 CDC37L1Q7L3B6 337 aa23.26■■□□□ 1.31
CSPG5-201ENST00000264723 GIGYF1O75420 1035 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-201ENST00000264723 IGHMBP2P38935 993 aaKnown RBP23.26■■□□□ 1.31
CSPG5-201ENST00000264723 SAMD1Q6SPF0 538 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-201ENST00000264723 ZNF771Q7L3S4 317 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-201ENST00000264723 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
CSPG5-201ENST00000264723 PTGS1P23219 599 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 BEND3Q5T5X7 828 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 IL25Q9H293 177 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 CLIP2Q9UDT6 1046 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 CTNNA3Q9UI47 895 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 SETD1BQ9UPS6 1966 aaKnown RBP23.25■■□□□ 1.31
CSPG5-201ENST00000264723 PTPRMP28827 1452 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 JAK2O60674 1132 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 AMOTL1Q8IY63 956 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 PDILTQ8N807 584 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 FAM89AQ96GI7 184 aa23.25■■□□□ 1.31
CSPG5-201ENST00000264723 TLR7Q9NYK1 1049 aaKnown RBP23.25■■□□□ 1.31
CSPG5-201ENST00000264723 BTG4Q9NY30 223 aa23.24■■□□□ 1.31
CSPG5-201ENST00000264723 ANKRD18BA2A2Z9 1011 aa23.24■■□□□ 1.31
CSPG5-201ENST00000264723 MINDY4BA8MYZ0 360 aa23.24■■□□□ 1.31
CSPG5-201ENST00000264723 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
CSPG5-201ENST00000264723 ERCC4Q92889 916 aaPredicted RBP23.24■■□□□ 1.31
CSPG5-201ENST00000264723 ZNF396Q96N95 335 aaPredicted RBP23.24■■□□□ 1.31
CSPG5-201ENST00000264723 SEC62Q99442 399 aaKnown RBP23.24■■□□□ 1.31
CSPG5-201ENST00000264723 TTC41PQ6P2S7 1318 aa23.24■■□□□ 1.31
CSPG5-201ENST00000264723 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
CSPG5-201ENST00000264723 SLC27A2O14975 620 aa23.23■■□□□ 1.31
CSPG5-201ENST00000264723 TYRO3Q06418 890 aa23.23■■□□□ 1.31
CSPG5-201ENST00000264723 CCDC112Q8NEF3 446 aa23.23■■□□□ 1.31
CSPG5-201ENST00000264723 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
CSPG5-201ENST00000264723 INO80Q9ULG1 1556 aaPredicted RBP23.23■■□□□ 1.31
CSPG5-201ENST00000264723 A0A0D9SFI3 127 aa23.23■■□□□ 1.31
CSPG5-201ENST00000264723 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
CSPG5-201ENST00000264723 SLC52A2Q9HAB3 445 aa23.23■■□□□ 1.31
CSPG5-201ENST00000264723 MCM5P33992 734 aa23.23■■□□□ 1.31
CSPG5-201ENST00000264723 APOBRQ0VD83 1088 aa23.22■■□□□ 1.31
CSPG5-201ENST00000264723 FSIP1Q8NA03 581 aa23.22■■□□□ 1.31
CSPG5-201ENST00000264723 NACAP1Q9BZK3 213 aa23.22■■□□□ 1.31
CSPG5-201ENST00000264723 TPM3P06753 285 aa23.22■■□□□ 1.31
CSPG5-201ENST00000264723 ALKQ9UM73 1620 aa23.22■■□□□ 1.31
CSPG5-201ENST00000264723 DDIT3P35638 169 aa23.22■■□□□ 1.31
CSPG5-201ENST00000264723 NCOA5Q9HCD5 579 aaKnown RBP23.22■■□□□ 1.31
CSPG5-201ENST00000264723 CDK12Q9NYV4 1490 aaPredicted RBP23.21■■□□□ 1.31
CSPG5-201ENST00000264723 GNL3LQ9NVN8 582 aaKnown RBP23.21■■□□□ 1.31
CSPG5-201ENST00000264723 TPCN1Q9ULQ1 816 aa23.21■■□□□ 1.31
CSPG5-201ENST00000264723 KIDINS220Q9ULH0 1771 aa23.21■■□□□ 1.31
CSPG5-201ENST00000264723 NRXN1Q9ULB1 1477 aa23.21■■□□□ 1.31
CSPG5-201ENST00000264723 CCAR1Q8IX12 1150 aaKnown RBP23.21■■□□□ 1.31
CSPG5-201ENST00000264723 PDCL2Q8N4E4 241 aa23.21■■□□□ 1.31
CSPG5-201ENST00000264723 LSG1Q9H089 658 aaKnown RBP23.21■■□□□ 1.31
CSPG5-201ENST00000264723 MROH2AA6NES4 1674 aa23.21■■□□□ 1.31
CSPG5-201ENST00000264723 IGSF3O75054 1194 aa23.21■■□□□ 1.31
CSPG5-201ENST00000264723 STAP2Q9UGK3 403 aa23.21■■□□□ 1.31
CSPG5-201ENST00000264723 UVSSAQ2YD98 709 aa23.2■■□□□ 1.31
CSPG5-201ENST00000264723 ARHGEF25Q86VW2 580 aa23.2■■□□□ 1.31
CSPG5-201ENST00000264723 NAT10Q9H0A0 1025 aaKnown RBP23.2■■□□□ 1.31
CSPG5-201ENST00000264723 ARHGEF40Q8TER5 1519 aa23.2■■□□□ 1.3
CSPG5-201ENST00000264723 TNNT1P13805 278 aa23.2■■□□□ 1.3
CSPG5-201ENST00000264723 LIG1P18858 919 aa23.2■■□□□ 1.3
CSPG5-201ENST00000264723 HS1BP3Q53T59 392 aa23.2■■□□□ 1.3
CSPG5-201ENST00000264723 ZSCAN25Q6NSZ9 544 aa23.2■■□□□ 1.3
CSPG5-201ENST00000264723 MYOM1P52179 1685 aa23.19■■□□□ 1.3
CSPG5-201ENST00000264723 CUL4AQ13619 759 aa23.19■■□□□ 1.3
CSPG5-201ENST00000264723 FAM200AQ8TCP9 573 aa23.19■■□□□ 1.3
CSPG5-201ENST00000264723 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.19■■□□□ 1.3
CSPG5-201ENST00000264723 V9GYY5 206 aaPredicted RBP23.19■■□□□ 1.3
CSPG5-201ENST00000264723 CCDC69A6NI79 296 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 ZNF213O14771 459 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 HSP90AA4PQ58FG1 418 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 OTUD7BQ6GQQ9 843 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 MTERF4Q7Z6M4 381 aaKnown RBP23.18■■□□□ 1.3
CSPG5-201ENST00000264723 MED14O60244 1454 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 NAPBQ9H115 298 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 MTMR6Q9Y217 621 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 CAMSAP1Q5T5Y3 1602 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 PPP4R3BQ5MIZ7 849 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 CEP57L1Q8IYX8 460 aa23.18■■□□□ 1.3
CSPG5-201ENST00000264723 ZHX1Q9UKY1 873 aaPredicted RBP23.18■■□□□ 1.3
CSPG5-201ENST00000264723 METTL22Q9BUU2 404 aaPredicted RBP23.17■■□□□ 1.3
CSPG5-201ENST00000264723 NEXMIFQ5QGS0 1516 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 A0A087WWV3 80 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 SLC4A8Q2Y0W8 1093 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 PI4K2BQ8TCG2 481 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 DDX19AQ9NUU7 478 aaKnown RBP23.17■■□□□ 1.3
CSPG5-201ENST00000264723 DYNC1I1O14576 645 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 HOXB7P09629 217 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 GCKRQ14397 625 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 TTLL5Q6EMB2 1281 aa23.17■■□□□ 1.3
CSPG5-201ENST00000264723 BABAM1Q9NWV8 329 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms