RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 EVCP57679 992 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 KIAA1328Q86T90 577 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 PROSER2Q86WR7 435 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-201ENST00000261646 UTP14AQ9BVJ6 771 aaKnown RBP18.74■□□□□ 0.59
SREBF1-201ENST00000261646 NRBP1Q9UHY1 535 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 MAP3K2Q9Y2U5 619 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 CDC37L1Q7L3B6 337 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 LEO1Q8WVC0 666 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-201ENST00000261646 RASSF4Q9H2L5 321 aa18.74■□□□□ 0.59
SREBF1-201ENST00000261646 DBF4Q9UBU7 674 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-201ENST00000261646 HAND2P61296 217 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 EYA1Q99502 592 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 PHAXQ9H814 394 aaKnown RBP18.73■□□□□ 0.59
SREBF1-201ENST00000261646 SYKP43405 635 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 CEP89Q96ST8 783 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 CDC42BPAQ5VT25 1732 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 SHTN1A0MZ66 631 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 ERCC6LQ2NKX8 1250 aa18.73■□□□□ 0.59
SREBF1-201ENST00000261646 DDX46Q7L014 1031 aaKnown RBP18.73■□□□□ 0.59
SREBF1-201ENST00000261646 MARCKSP29966 332 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-201ENST00000261646 MAP9Q49MG5 647 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 PRDM15P57071 1507 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-201ENST00000261646 VPS18Q9P253 973 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 CHPF2Q9P2E5 772 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 MTMR7Q9Y216 660 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 ATP2B3Q16720 1220 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 CCDC102BQ68D86 513 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 CARD6Q9BX69 1037 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
SREBF1-201ENST00000261646 A0A1B0GVL5 298 aa18.71■□□□□ 0.59
SREBF1-201ENST00000261646 KIF2CQ99661 725 aa18.71■□□□□ 0.59
SREBF1-201ENST00000261646 GOLIM4O00461 696 aa18.71■□□□□ 0.59
SREBF1-201ENST00000261646 TUBB4AP04350 444 aa18.71■□□□□ 0.59
SREBF1-201ENST00000261646 TXLNAP40222 546 aa18.71■□□□□ 0.59
SREBF1-201ENST00000261646 KARSQ15046 597 aaKnown RBP18.71■□□□□ 0.59
SREBF1-201ENST00000261646 ABCC1P33527 1531 aa18.71■□□□□ 0.58
SREBF1-201ENST00000261646 POTEB2H3BUK9 544 aa18.71■□□□□ 0.58
SREBF1-201ENST00000261646 IFIT1P09914 478 aaKnown RBP18.71■□□□□ 0.58
SREBF1-201ENST00000261646 TTC6Q86TZ1 520 aa18.71■□□□□ 0.58
SREBF1-201ENST00000261646 MTMR6Q9Y217 621 aa18.71■□□□□ 0.58
SREBF1-201ENST00000261646 MYD88Q99836 296 aa18.7■□□□□ 0.58
SREBF1-201ENST00000261646 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.7■□□□□ 0.582e-7■■■□□ 17.3
SREBF1-201ENST00000261646 RIMS2Q9UQ26 1411 aa18.7■□□□□ 0.58
SREBF1-201ENST00000261646 IVLP07476 585 aa18.7■□□□□ 0.58
SREBF1-201ENST00000261646 MNAT1P51948 309 aa18.7■□□□□ 0.58
SREBF1-201ENST00000261646 EIF5P55010 431 aaKnown RBP18.7■□□□□ 0.58
SREBF1-201ENST00000261646 RTL1A6NKG5 1358 aa18.7■□□□□ 0.58
SREBF1-201ENST00000261646 GTF2E1P29083 439 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-201ENST00000261646 IRX3P78415 501 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-201ENST00000261646 KCNG4Q8TDN1 519 aa18.7■□□□□ 0.58
SREBF1-201ENST00000261646 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
SREBF1-201ENST00000261646 PUF60Q9UHX1 559 aaKnown RBP18.7■□□□□ 0.58
SREBF1-201ENST00000261646 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
SREBF1-201ENST00000261646 GOLGA6L10A6NI86 522 aa18.69■□□□□ 0.58
SREBF1-201ENST00000261646 CUL4AQ13619 759 aa18.69■□□□□ 0.58
SREBF1-201ENST00000261646 PTCD1O75127 700 aaKnown RBP18.69■□□□□ 0.58
SREBF1-201ENST00000261646 TTC41PQ6P2S7 1318 aa18.69■□□□□ 0.58
SREBF1-201ENST00000261646 CHL1O00533 1208 aa18.69■□□□□ 0.58
SREBF1-201ENST00000261646 ATF3P18847 181 aa18.69■□□□□ 0.58
SREBF1-201ENST00000261646 CTR9Q6PD62 1173 aa18.69■□□□□ 0.58
SREBF1-201ENST00000261646 GOLGA1Q92805 767 aa18.69■□□□□ 0.58
SREBF1-201ENST00000261646 NUP88Q99567 741 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-201ENST00000261646 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
SREBF1-201ENST00000261646 SPTLC2O15270 562 aa18.68■□□□□ 0.58
SREBF1-201ENST00000261646 STRN4Q9NRL3 753 aa18.68■□□□□ 0.58
SREBF1-201ENST00000261646 IDH1O75874 414 aaKnown RBP18.68■□□□□ 0.58
SREBF1-201ENST00000261646 FAM160A1Q05DH4 1040 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 ME3Q16798 604 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 IQCEQ6IPM2 695 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 LZTFL1Q9NQ48 299 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 ZDHHC9Q9Y397 364 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 CLEC17AQ6ZS10 378 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 CCDC144CPQ8IYA2 1237 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 PTPDC1A2A3K4 754 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 ATP5J2-PTCD1G3V325 749 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 NR1I2O75469 434 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 ODF2Q5BJF6 829 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 GIMAP7Q8NHV1 300 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 SNRKQ9NRH2 765 aa18.67■□□□□ 0.58
SREBF1-201ENST00000261646 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-201ENST00000261646 STIM1Q13586 685 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 CACTINQ8WUQ7 758 aaKnown RBP18.66■□□□□ 0.58
SREBF1-201ENST00000261646 FAM227BQ96M60 508 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 KLF18A0A0U1RQI7 1052 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 CTAGE15A4D2H0 777 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 RHOXF2BP0C7M4 288 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 CTAGE8P0CG41 777 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 CTAGE6Q86UF2 777 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 CTAGE4Q8IX94 777 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 RHOXF2Q9BQY4 288 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 CNNM1Q9NRU3 951 aa18.66■□□□□ 0.58
SREBF1-201ENST00000261646 ZNF213O14771 459 aa18.65■□□□□ 0.58
SREBF1-201ENST00000261646 RASEFQ8IZ41 740 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms