RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 KCNA3P22001 575 aa17.71■□□□□ 0.43
VPS25-201ENST00000253794 MTX1Q13505 466 aa17.71■□□□□ 0.43
VPS25-201ENST00000253794 EPHA10Q5JZY3 1008 aa17.71■□□□□ 0.43
VPS25-201ENST00000253794 ANKRD44Q8N8A2 993 aa17.71■□□□□ 0.43
VPS25-201ENST00000253794 PPP1R1BQ9UD71 204 aaPredicted RBP17.71■□□□□ 0.43
VPS25-201ENST00000253794 H0YIN7 160 aa17.7■□□□□ 0.42
VPS25-201ENST00000253794 NPR1P16066 1061 aa17.7■□□□□ 0.42
VPS25-201ENST00000253794 AAMPQ13685 434 aa17.7■□□□□ 0.42
VPS25-201ENST00000253794 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
VPS25-201ENST00000253794 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
VPS25-201ENST00000253794 MASTLQ96GX5 879 aa17.7■□□□□ 0.42
VPS25-201ENST00000253794 CRAMP1Q96RY5 1269 aa17.7■□□□□ 0.42
VPS25-201ENST00000253794 BICC1Q9H694 974 aaKnown RBP17.7■□□□□ 0.42
VPS25-201ENST00000253794 LRRFIP2Q9Y608 721 aaKnown RBP17.7■□□□□ 0.42
VPS25-201ENST00000253794 C2CD5Q86YS7 1000 aa17.69■□□□□ 0.42
VPS25-201ENST00000253794 SYT17Q9BSW7 474 aa17.69■□□□□ 0.42
VPS25-201ENST00000253794 DPEP1P16444 411 aa17.68■□□□□ 0.42
VPS25-201ENST00000253794 CHRNA5P30532 468 aa17.68■□□□□ 0.42
VPS25-201ENST00000253794 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
VPS25-201ENST00000253794 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
VPS25-201ENST00000253794 CRBNQ96SW2 442 aa17.68■□□□□ 0.42
VPS25-201ENST00000253794 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
VPS25-201ENST00000253794 NLGN2Q8NFZ4 835 aa17.67■□□□□ 0.42
VPS25-201ENST00000253794 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
VPS25-201ENST00000253794 RBM17Q96I25 401 aaKnown RBP17.67■□□□□ 0.42
VPS25-201ENST00000253794 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
VPS25-201ENST00000253794 GREM2Q9H772 168 aa17.66■□□□□ 0.42
VPS25-201ENST00000253794 A0A0G2JLW4 131 aa17.65■□□□□ 0.42
VPS25-201ENST00000253794 GRAPQ13588 217 aa17.65■□□□□ 0.42
VPS25-201ENST00000253794 FAM161AQ3B820 660 aa17.65■□□□□ 0.42
VPS25-201ENST00000253794 DDX46Q7L014 1031 aaKnown RBP17.65■□□□□ 0.42
VPS25-201ENST00000253794 GRAPLQ8TC17 118 aaPredicted RBP17.65■□□□□ 0.42
VPS25-201ENST00000253794 ITGA6P23229 1130 aa17.64■□□□□ 0.41
VPS25-201ENST00000253794 RFX5P48382 616 aaPredicted RBP17.64■□□□□ 0.41
VPS25-201ENST00000253794 CEP85Q6P2H3 762 aa17.64■□□□□ 0.41
VPS25-201ENST00000253794 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
VPS25-201ENST00000253794 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
VPS25-201ENST00000253794 PIM2Q9P1W9 311 aa17.64■□□□□ 0.41
VPS25-201ENST00000253794 COL4A1P02462 1669 aa17.64■□□□□ 0.41
VPS25-201ENST00000253794 BBOX1O75936 387 aa17.63■□□□□ 0.41
VPS25-201ENST00000253794 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
VPS25-201ENST00000253794 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
VPS25-201ENST00000253794 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
VPS25-201ENST00000253794 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
VPS25-201ENST00000253794 SSH3Q8TE77 659 aa17.63■□□□□ 0.41
VPS25-201ENST00000253794 CDC5LQ99459 802 aaKnown RBP17.63■□□□□ 0.41
VPS25-201ENST00000253794 SEC31BQ9NQW1 1179 aa17.63■□□□□ 0.41
VPS25-201ENST00000253794 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
VPS25-201ENST00000253794 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
VPS25-201ENST00000253794 POLA2Q14181 598 aa17.62■□□□□ 0.41
VPS25-201ENST00000253794 CCDC57Q2TAC2 916 aa17.62■□□□□ 0.41
VPS25-201ENST00000253794 EXOC6Q8TAG9 804 aa17.62■□□□□ 0.41
VPS25-201ENST00000253794 C7orf43Q8WVR3 580 aa17.62■□□□□ 0.41
VPS25-201ENST00000253794 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
VPS25-201ENST00000253794 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
VPS25-201ENST00000253794 C1orf115Q9H7X2 142 aa17.62■□□□□ 0.41
VPS25-201ENST00000253794 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
VPS25-201ENST00000253794 PRPF40BQ6NWY9 871 aaKnown RBP17.61■□□□□ 0.41
VPS25-201ENST00000253794 CCDC85AQ96PX6 553 aaPredicted RBP17.61■□□□□ 0.41
VPS25-201ENST00000253794 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
VPS25-201ENST00000253794 SNED1Q8TER0 1413 aa17.61■□□□□ 0.41
VPS25-201ENST00000253794 PNMA6EA0A0J9YXQ4 647 aa17.6■□□□□ 0.41
VPS25-201ENST00000253794 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
VPS25-201ENST00000253794 PTPN12Q05209 780 aaKnown RBP17.6■□□□□ 0.41
VPS25-201ENST00000253794 DALRD3Q5D0E6 543 aaKnown RBP17.6■□□□□ 0.41
VPS25-201ENST00000253794 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
VPS25-201ENST00000253794 BSDC1Q9NW68 430 aaPredicted RBP17.6■□□□□ 0.41
VPS25-201ENST00000253794 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
VPS25-201ENST00000253794 CC2D2BQ6DHV5 1058 aa17.59■□□□□ 0.41
VPS25-201ENST00000253794 ANKRD18AQ8IVF6 992 aa17.59■□□□□ 0.41
VPS25-201ENST00000253794 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
VPS25-201ENST00000253794 CHMP3Q9Y3E7 222 aa17.59■□□□□ 0.41
VPS25-201ENST00000253794 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
VPS25-201ENST00000253794 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
VPS25-201ENST00000253794 ARFGEF1Q9Y6D6 1849 aa17.58■□□□□ 0.41
VPS25-201ENST00000253794 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
VPS25-201ENST00000253794 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.4
VPS25-201ENST00000253794 GRIPAP1Q4V328 841 aa17.58■□□□□ 0.4
VPS25-201ENST00000253794 SP8Q8IXZ3 490 aa17.58■□□□□ 0.4
VPS25-201ENST00000253794 CIAO1O76071 339 aa17.57■□□□□ 0.4
VPS25-201ENST00000253794 IRX6P78412 446 aaPredicted RBP17.57■□□□□ 0.4
VPS25-201ENST00000253794 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
VPS25-201ENST00000253794 NOP58Q9Y2X3 529 aaKnown RBP17.57■□□□□ 0.4
VPS25-201ENST00000253794 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
VPS25-201ENST00000253794 TAF1P21675 1872 aa17.56■□□□□ 0.4
VPS25-201ENST00000253794 HMMRO75330 724 aa17.56■□□□□ 0.4
VPS25-201ENST00000253794 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
VPS25-201ENST00000253794 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 EYA2O00167 538 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 ERICH6BQ5W0A0 696 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 LDHAL6AQ6ZMR3 332 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 MPHOSPH8Q99549 860 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 MINPP1Q9UNW1 487 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 RIPOR2Q9Y4F9 1068 aa17.55■□□□□ 0.4
VPS25-201ENST00000253794 HDAC1Q13547 482 aaPredicted RBP17.54■□□□□ 0.4
VPS25-201ENST00000253794 ATG9AQ7Z3C6 839 aa17.54■□□□□ 0.4
VPS25-201ENST00000253794 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
VPS25-201ENST00000253794 CACNA1SQ13698 1873 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms