RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 FOXD4Q12950 439 aaPredicted RBP15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 GDPD2Q9HCC8 539 aa15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 ARFGAP3Q9NP61 516 aa15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 ERBB3P21860 1342 aa15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 URI1O94763 535 aaPredicted RBP15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 PYGLP06737 847 aa15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 AMOTQ4VCS5 1084 aa15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 TMC6Q7Z403 805 aa15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
COLGALT1-201ENST00000252599 CEBPZQ03701 1054 aaKnown RBP15.41■□□□□ 0.06
COLGALT1-201ENST00000252599 ZNHIT6Q9NWK9 470 aaKnown RBP15.41■□□□□ 0.06
COLGALT1-201ENST00000252599 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
COLGALT1-201ENST00000252599 RILPL2Q969X0 211 aa15.41■□□□□ 0.06
COLGALT1-201ENST00000252599 GCFC2P16383 781 aaKnown RBP15.41■□□□□ 0.06
COLGALT1-201ENST00000252599 MCM10Q7L590 875 aa15.41■□□□□ 0.06
COLGALT1-201ENST00000252599 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 SEC31AO94979 1220 aaKnown RBP15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 EIF5P55010 431 aaKnown RBP15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 TMEM63CQ9P1W3 806 aa15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 CCNHP51946 323 aaPredicted RBP15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 SYTL4Q96C24 671 aaPredicted RBP15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 TSPAN18Q96SJ8 248 aa15.4■□□□□ 0.06
COLGALT1-201ENST00000252599 SMARCA5O60264 1052 aaPredicted RBP15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 ZNF189O75820 626 aaPredicted RBP15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 BRD1O95696 1058 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 ACTN3Q08043 901 aaPredicted RBP15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 KIAA1524Q8TCG1 905 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 ADAM21Q9UKJ8 722 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 FYB1O15117 783 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 KRT24Q2M2I5 525 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 SWT1Q5T5J6 900 aaKnown RBP15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 TRAIPQ9BWF2 469 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 LMNB1P20700 586 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 NUDT16Q96DE0 195 aaKnown RBP15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 RABL2BQ9UNT1 228 aa15.39■□□□□ 0.05
COLGALT1-201ENST00000252599 RBM6P78332 1123 aaKnown RBP15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 CHD1LQ86WJ1 897 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 SUGP1Q8IWZ8 645 aaKnown RBP15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 SPDYE1Q8NFV5 336 aaPredicted RBP15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 UGGT1Q9NYU2 1555 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 LAMB3Q13751 1172 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 USHBP1Q8N6Y0 703 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 PHC3Q8NDX5 983 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 HNRNPH1P31943 449 aaKnown RBP15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 CEP85LQ5SZL2 805 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 BORCS6Q96GS4 357 aa15.38■□□□□ 0.05
COLGALT1-201ENST00000252599 ANKRD18BA2A2Z9 1011 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 BECN2A8MW95 431 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 CTIFO43310 598 aaKnown RBP15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 PHACTR3Q96KR7 559 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 ZSWIM4Q9H7M6 989 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 MKRN1Q9UHC7 482 aaKnown RBP15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 DNAI1Q9UI46 699 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 ZNF521Q96K83 1311 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 XBP1P17861 261 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 CLCN6P51797 869 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 CPLX2Q6PUV4 134 aaKnown RBP15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 TMCO5AQ8N6Q1 288 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 B4GALNT2Q8NHY0 566 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 MTMR7Q9Y216 660 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 LRMPQ12912 555 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 GNPTABQ3T906 1256 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 ACBD5Q5T8D3 534 aaPredicted RBP15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 CLIP2Q9UDT6 1046 aa15.37■□□□□ 0.05
COLGALT1-201ENST00000252599 USP19O94966 1318 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 GSCP56915 257 aaPredicted RBP15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 C1QTNF12Q5T7M4 302 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 SEPT14Q6ZU15 432 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 TMEM110Q86TL2 294 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 ZMYM4Q5VZL5 1548 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 MYSM1Q5VVJ2 828 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 TSHZ3Q63HK5 1081 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 WDR7Q9Y4E6 1490 aa15.36■□□□□ 0.05
COLGALT1-201ENST00000252599 ABTB2Q8N961 1025 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 CHAMP1Q96JM3 812 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 EXOC6BQ9Y2D4 811 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 RPS6KA3P51812 740 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 ATAD2Q6PL18 1390 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 SCRN1Q12765 414 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 MAP7D1Q3KQU3 841 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 CADPS2Q86UW7 1296 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 SMARCC1Q92922 1105 aaPredicted RBP15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 SAMD9LQ8IVG5 1584 aa15.35■□□□□ 0.05
COLGALT1-201ENST00000252599 SMAPO00193 183 aa15.34■□□□□ 0.05
COLGALT1-201ENST00000252599 ST18O60284 1047 aa15.34■□□□□ 0.05
COLGALT1-201ENST00000252599 ATP2C2O75185 946 aa15.34■□□□□ 0.05
COLGALT1-201ENST00000252599 PEX14O75381 377 aa15.34■□□□□ 0.05
COLGALT1-201ENST00000252599 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms