RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 MYH3P11055 1940 aa27.09■■□□□ 1.93
HCFC1R1-201ENST00000248089 VAMP4O75379 141 aa27.08■■□□□ 1.93
HCFC1R1-201ENST00000248089 NEXNQ0ZGT2 675 aa27.08■■□□□ 1.93
HCFC1R1-201ENST00000248089 FLIIQ13045 1269 aa27.08■■□□□ 1.93
HCFC1R1-201ENST00000248089 JDP2Q8WYK2 163 aa27.08■■□□□ 1.93
HCFC1R1-201ENST00000248089 SCN4AP35499 1836 aa27.07■■□□□ 1.92
HCFC1R1-201ENST00000248089 PCCAP05165 728 aaPredicted RBP27.07■■□□□ 1.92
HCFC1R1-201ENST00000248089 FKBP5Q13451 457 aaPredicted RBP27.07■■□□□ 1.92
HCFC1R1-201ENST00000248089 SF3B3Q15393 1217 aaKnown RBP27.07■■□□□ 1.92
HCFC1R1-201ENST00000248089 LARGE2Q8N3Y3 721 aa27.07■■□□□ 1.92
HCFC1R1-201ENST00000248089 POTECB2RU33 542 aa27.06■■□□□ 1.92
HCFC1R1-201ENST00000248089 SP8Q8IXZ3 490 aa27.06■■□□□ 1.92
HCFC1R1-201ENST00000248089 IGKV5-2P06315 115 aa27.05■■□□□ 1.92
HCFC1R1-201ENST00000248089 HSP90B1P14625 803 aaKnown RBP27.05■■□□□ 1.92
HCFC1R1-201ENST00000248089 DPP8Q6V1X1 898 aaPredicted RBP27.05■■□□□ 1.92
HCFC1R1-201ENST00000248089 ZNF521Q96K83 1311 aa27.05■■□□□ 1.92
HCFC1R1-201ENST00000248089 PPIP5K2O43314 1243 aa27.04■■□□□ 1.92
HCFC1R1-201ENST00000248089 FSTL1Q12841 308 aa27.04■■□□□ 1.92
HCFC1R1-201ENST00000248089 CWF19L2Q2TBE0 894 aaKnown RBP27.04■■□□□ 1.92
HCFC1R1-201ENST00000248089 MPNDQ8N594 471 aa27.04■■□□□ 1.92
HCFC1R1-201ENST00000248089 SMC1BQ8NDV3 1235 aa27.04■■□□□ 1.92
HCFC1R1-201ENST00000248089 CELF1Q92879 486 aaKnown RBP27.04■■□□□ 1.92
HCFC1R1-201ENST00000248089 SPEF2Q9C093 1822 aa27.04■■□□□ 1.92
HCFC1R1-201ENST00000248089 FZD9O00144 591 aa27.03■■□□□ 1.92
HCFC1R1-201ENST00000248089 AOC3Q16853 763 aa27.03■■□□□ 1.92
HCFC1R1-201ENST00000248089 TMC4Q7Z404 712 aa27.03■■□□□ 1.92
HCFC1R1-201ENST00000248089 DUOX1Q9NRD9 1551 aa27.02■■□□□ 1.92
HCFC1R1-201ENST00000248089 NIM1KQ8IY84 436 aa27.02■■□□□ 1.92
HCFC1R1-201ENST00000248089 SUPT20HQ8NEM7 779 aa27.02■■□□□ 1.92
HCFC1R1-201ENST00000248089 CCDC85AQ96PX6 553 aaPredicted RBP27.02■■□□□ 1.92
HCFC1R1-201ENST00000248089 NEURL1BA8MQ27 555 aa27.01■■□□□ 1.91
HCFC1R1-201ENST00000248089 CCER2I3L3R5 266 aa27.01■■□□□ 1.91
HCFC1R1-201ENST00000248089 PDE8AO60658 829 aa27.01■■□□□ 1.91
HCFC1R1-201ENST00000248089 EIF6P56537 245 aaKnown RBP27.01■■□□□ 1.91
HCFC1R1-201ENST00000248089 CDHR2Q9BYE9 1310 aa27■■□□□ 1.91
HCFC1R1-201ENST00000248089 IQCA1LA6NCM1 817 aa27■■□□□ 1.91
HCFC1R1-201ENST00000248089 CCDC152Q4G0S7 254 aa27■■□□□ 1.91
HCFC1R1-201ENST00000248089 DNAAF4Q8WXU2 420 aa27■■□□□ 1.91
HCFC1R1-201ENST00000248089 L3MBTL3Q96JM7 780 aaPredicted RBP27■■□□□ 1.91
HCFC1R1-201ENST00000248089 GJA3Q9Y6H8 435 aa27■■□□□ 1.91
HCFC1R1-201ENST00000248089 APLP1P51693 650 aa26.99■■□□□ 1.91
HCFC1R1-201ENST00000248089 RTFDC1Q9BY42 306 aaPredicted RBP26.99■■□□□ 1.91
HCFC1R1-201ENST00000248089 SEC31BQ9NQW1 1179 aa26.99■■□□□ 1.91
HCFC1R1-201ENST00000248089 LTBP1Q14766 1721 aa26.98■■□□□ 1.91
HCFC1R1-201ENST00000248089 UBE3BQ7Z3V4 1068 aa26.97■■□□□ 1.91
HCFC1R1-201ENST00000248089 GPC2Q8N158 579 aa26.97■■□□□ 1.91
HCFC1R1-201ENST00000248089 CTSWP56202 376 aa26.96■■□□□ 1.91
HCFC1R1-201ENST00000248089 RPS8P62241 208 aaKnown RBP26.96■■□□□ 1.91
HCFC1R1-201ENST00000248089 VPS33BQ9H267 617 aa26.96■■□□□ 1.91
HCFC1R1-201ENST00000248089 NSFL1CQ9UNZ2 370 aaKnown RBP26.96■■□□□ 1.91
HCFC1R1-201ENST00000248089 TAF1DQ9H5J8 278 aaPredicted RBP26.95■■□□□ 1.9
HCFC1R1-201ENST00000248089 HACL1Q9UJ83 578 aa26.95■■□□□ 1.9
HCFC1R1-201ENST00000248089 E9PSI1 815 aa26.94■■□□□ 1.9
HCFC1R1-201ENST00000248089 F6X3S4 739 aa26.94■■□□□ 1.9
HCFC1R1-201ENST00000248089 POTEIP0CG38 1075 aa26.94■■□□□ 1.9
HCFC1R1-201ENST00000248089 POTEJP0CG39 1038 aa26.94■■□□□ 1.9
HCFC1R1-201ENST00000248089 GPSM2P81274 684 aa26.94■■□□□ 1.9
HCFC1R1-201ENST00000248089 GCKRQ14397 625 aa26.94■■□□□ 1.9
HCFC1R1-201ENST00000248089 LINS1Q8NG48 757 aa26.94■■□□□ 1.9
HCFC1R1-201ENST00000248089 KIAA2012Q0VF49 1180 aa26.93■■□□□ 1.9
HCFC1R1-201ENST00000248089 EAPPQ56P03 285 aaPredicted RBP26.93■■□□□ 1.9
HCFC1R1-201ENST00000248089 C6orf229H3BNL8 230 aa26.92■■□□□ 1.9
HCFC1R1-201ENST00000248089 ZNRF3Q9ULT6 936 aa26.92■■□□□ 1.9
HCFC1R1-201ENST00000248089 H7C1W4 665 aa26.91■■□□□ 1.9
HCFC1R1-201ENST00000248089 EPHX2P34913 555 aa26.91■■□□□ 1.9
HCFC1R1-201ENST00000248089 HTRA3P83110 453 aa26.91■■□□□ 1.9
HCFC1R1-201ENST00000248089 CHADLQ6NUI6 762 aa26.91■■□□□ 1.9
HCFC1R1-201ENST00000248089 ANKRD18AQ8IVF6 992 aa26.91■■□□□ 1.9
HCFC1R1-201ENST00000248089 LMOD1P29536 600 aaPredicted RBP26.9■■□□□ 1.9
HCFC1R1-201ENST00000248089 TTLL11Q8NHH1 800 aa26.9■■□□□ 1.9
HCFC1R1-201ENST00000248089 GREM2Q9H772 168 aa26.9■■□□□ 1.9
HCFC1R1-201ENST00000248089 ADAMTSL1Q8N6G6 1762 aa26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 RIMBP2O15034 1052 aa26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 SLFN5Q08AF3 891 aa26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 WASHC4Q2M389 1173 aa26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 LDHDQ86WU2 507 aa26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 CDC5LQ99459 802 aaKnown RBP26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 ANKIB1Q9P2G1 1089 aa26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 POLLQ9UGP5 575 aa26.89■■□□□ 1.9
HCFC1R1-201ENST00000248089 CDCA7LQ96GN5 454 aa26.88■■□□□ 1.89
HCFC1R1-201ENST00000248089 GPR101Q96P66 508 aaPredicted RBP26.88■■□□□ 1.89
HCFC1R1-201ENST00000248089 CXCL9Q07325 125 aa26.87■■□□□ 1.89
HCFC1R1-201ENST00000248089 BEND3Q5T5X7 828 aa26.87■■□□□ 1.89
HCFC1R1-201ENST00000248089 DIEXFQ68CQ4 756 aaKnown RBP26.87■■□□□ 1.89
HCFC1R1-201ENST00000248089 SLC4A10Q6U841 1118 aa26.87■■□□□ 1.89
HCFC1R1-201ENST00000248089 EYA3Q99504 573 aa26.87■■□□□ 1.89
HCFC1R1-201ENST00000248089 CLEC11AQ9Y240 323 aa26.87■■□□□ 1.89
HCFC1R1-201ENST00000248089 RAD17O75943 681 aa26.86■■□□□ 1.89
HCFC1R1-201ENST00000248089 UFL1O94874 794 aa26.86■■□□□ 1.89
HCFC1R1-201ENST00000248089 SCNN1DP51172 638 aa26.86■■□□□ 1.89
HCFC1R1-201ENST00000248089 CASP7P55210 303 aa26.86■■□□□ 1.89
HCFC1R1-201ENST00000248089 TBC1D16Q8TBP0 767 aa26.86■■□□□ 1.89
HCFC1R1-201ENST00000248089 DBNDD1Q9H9R9 158 aa26.86■■□□□ 1.89
HCFC1R1-201ENST00000248089 RTL9Q8NET4 1388 aa26.85■■□□□ 1.89
HCFC1R1-201ENST00000248089 CIAPIN1Q6FI81 312 aa26.85■■□□□ 1.89
HCFC1R1-201ENST00000248089 PNMA8AQ86V59 439 aaPredicted RBP26.85■■□□□ 1.89
HCFC1R1-201ENST00000248089 GGA1Q9UJY5 639 aa26.85■■□□□ 1.89
HCFC1R1-201ENST00000248089 YDJCA8MPS7 323 aa26.84■■□□□ 1.89
HCFC1R1-201ENST00000248089 EPS15P42566 896 aa26.84■■□□□ 1.89
HCFC1R1-201ENST00000248089 FAM161AQ3B820 660 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms