RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 GBP6Q6ZN66 633 aa15.85■□□□□ 0.13
HCFC2-201ENST00000229330 BMP2KQ9NSY1 1161 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 NUTM2BA6NNL0 878 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 NUTM2EB1AL46 878 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 GCOM1H8Y6P7 765 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 MYZAPP0CAP1 466 aa15.85■□□□□ 0.13
HCFC2-201ENST00000229330 NUTM2AQ8IVF1 878 aaPredicted RBP15.85■□□□□ 0.13
HCFC2-201ENST00000229330 PPP1R42Q7Z4L9 355 aa15.85■□□□□ 0.13
HCFC2-201ENST00000229330 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 ZNF75DP51815 510 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 USHBP1Q8N6Y0 703 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 RHPN1Q8TCX5 695 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.84■□□□□ 0.13
HCFC2-201ENST00000229330 TNRQ92752 1358 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 ATP2C2O75185 946 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 ATRIPQ8WXE1 791 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 SEPT11Q9NVA2 429 aaKnown RBP15.84■□□□□ 0.13
HCFC2-201ENST00000229330 GOPCQ9HD26 462 aa15.84■□□□□ 0.13
HCFC2-201ENST00000229330 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
HCFC2-201ENST00000229330 N4BP3O15049 544 aa15.83■□□□□ 0.13
HCFC2-201ENST00000229330 CEP57Q86XR8 500 aa15.83■□□□□ 0.13
HCFC2-201ENST00000229330 BRF1Q92994 677 aa15.83■□□□□ 0.13
HCFC2-201ENST00000229330 RBM8AQ9Y5S9 174 aaKnown RBP15.83■□□□□ 0.13
HCFC2-201ENST00000229330 PER1O15534 1290 aaPredicted RBP15.83■□□□□ 0.13
HCFC2-201ENST00000229330 PPP2R3AQ06190 1150 aa15.83■□□□□ 0.13
HCFC2-201ENST00000229330 NUP160Q12769 1436 aa15.83■□□□□ 0.12
HCFC2-201ENST00000229330 DISP1Q96F81 1524 aa15.83■□□□□ 0.12
HCFC2-201ENST00000229330 RTL1A6NKG5 1358 aa15.83■□□□□ 0.12
HCFC2-201ENST00000229330 CCDC196A0A1B0GTZ2 297 aa15.83■□□□□ 0.12
HCFC2-201ENST00000229330 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
HCFC2-201ENST00000229330 TCEANC2Q96MN5 208 aa15.83■□□□□ 0.12
HCFC2-201ENST00000229330 RHOXF2BP0C7M4 288 aa15.82■□□□□ 0.12
HCFC2-201ENST00000229330 SSRP1Q08945 709 aaKnown RBP15.82■□□□□ 0.12
HCFC2-201ENST00000229330 SOGA3Q5TF21 947 aa15.82■□□□□ 0.12
HCFC2-201ENST00000229330 PPM1EQ8WY54 764 aa15.82■□□□□ 0.12
HCFC2-201ENST00000229330 DRC1Q96MC2 740 aa15.82■□□□□ 0.12
HCFC2-201ENST00000229330 RHOXF2Q9BQY4 288 aa15.82■□□□□ 0.12
HCFC2-201ENST00000229330 KARSQ15046 597 aaKnown RBP15.82■□□□□ 0.12
HCFC2-201ENST00000229330 TDRD12Q587J7 1177 aaKnown RBP15.82■□□□□ 0.12
HCFC2-201ENST00000229330 HSP90AA4PQ58FG1 418 aa15.82■□□□□ 0.12
HCFC2-201ENST00000229330 CTCFLQ8NI51 663 aaPredicted RBP15.82■□□□□ 0.12
HCFC2-201ENST00000229330 UTP14AQ9BVJ6 771 aaKnown RBP15.82■□□□□ 0.12
HCFC2-201ENST00000229330 INSRP06213 1382 aa15.82■□□□□ 0.12
HCFC2-201ENST00000229330 PPFIA3O75145 1194 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 CCDC121Q6ZUS5 278 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 SHANK2Q9UPX8 1470 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 GADD45BO75293 160 aaPredicted RBP15.81■□□□□ 0.12
HCFC2-201ENST00000229330 SSBP05455 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
HCFC2-201ENST00000229330 IFIT1P09914 478 aaKnown RBP15.81■□□□□ 0.12
HCFC2-201ENST00000229330 FAM76AQ8TAV0 307 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 AIDAQ96BJ3 306 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 ZNF213O14771 459 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 MSL1Q68DK7 614 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 CBX8Q9HC52 389 aa15.81■□□□□ 0.12
HCFC2-201ENST00000229330 GOLGA8AA7E2F4 631 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 IDH1O75874 414 aaKnown RBP15.8■□□□□ 0.12
HCFC2-201ENST00000229330 CHMLP26374 656 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 CEP85Q6P2H3 762 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 ZBTB9Q96C00 473 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 TEX14Q8IWB6 1497 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 ACEP12821 1306 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 MTIF2P46199 727 aaKnown RBP15.8■□□□□ 0.12
HCFC2-201ENST00000229330 FGFR1OPO95684 399 aaKnown RBP15.8■□□□□ 0.12
HCFC2-201ENST00000229330 FBXO3Q9UK99 471 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 SLC12A7Q9Y666 1083 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 ABCC10Q5T3U5 1492 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 FAM83GA6ND36 823 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 ZNF569Q5MCW4 686 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 LZTFL1Q9NQ48 299 aa15.8■□□□□ 0.12
HCFC2-201ENST00000229330 CYLC1P35663 651 aaPredicted RBP15.79■□□□□ 0.12
HCFC2-201ENST00000229330 CARD6Q9BX69 1037 aa15.79■□□□□ 0.12
HCFC2-201ENST00000229330 GNL3LQ9NVN8 582 aaKnown RBP15.79■□□□□ 0.12
HCFC2-201ENST00000229330 OAS2P29728 719 aaKnown RBP15.79■□□□□ 0.12
HCFC2-201ENST00000229330 IARSP41252 1262 aaKnown RBP15.79■□□□□ 0.12
HCFC2-201ENST00000229330 ATP8B2P98198 1209 aa15.79■□□□□ 0.12
HCFC2-201ENST00000229330 LARP1Q6PKG0 1096 aaKnown RBP15.79■□□□□ 0.12
HCFC2-201ENST00000229330 VPS36Q86VN1 386 aa15.79■□□□□ 0.12
HCFC2-201ENST00000229330 TSG101Q99816 390 aa15.79■□□□□ 0.12
HCFC2-201ENST00000229330 BLMP54132 1417 aaPredicted RBP15.79■□□□□ 0.12
HCFC2-201ENST00000229330 AFAP1L1Q8TED9 768 aa15.79■□□□□ 0.12
HCFC2-201ENST00000229330 AMOTQ4VCS5 1084 aa15.79■□□□□ 0.12
HCFC2-201ENST00000229330 TESK2Q96S53 571 aa15.79■□□□□ 0.12
HCFC2-201ENST00000229330 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
HCFC2-201ENST00000229330 ZBTB7BO15156 539 aaPredicted RBP15.78■□□□□ 0.12
HCFC2-201ENST00000229330 CCDC114Q96M63 670 aa15.78■□□□□ 0.12
HCFC2-201ENST00000229330 CLSTN2Q9H4D0 955 aa15.78■□□□□ 0.12
HCFC2-201ENST00000229330 ANTXR1Q9H6X2 564 aa15.78■□□□□ 0.12
HCFC2-201ENST00000229330 UHRF1BP1LA0JNW5 1464 aa15.78■□□□□ 0.12
HCFC2-201ENST00000229330 ZSCAN26Q16670 478 aa15.78■□□□□ 0.12
HCFC2-201ENST00000229330 DNAJC21Q5F1R6 531 aaKnown RBP15.78■□□□□ 0.12
HCFC2-201ENST00000229330 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
HCFC2-201ENST00000229330 TTC21BQ7Z4L5 1316 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 SPTLC2O15270 562 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 SPAG1Q07617 926 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 Q6ZUG5 572 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 C8orf58Q8NAV2 365 aa15.77■□□□□ 0.12
HCFC2-201ENST00000229330 BAG1Q99933 345 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms