RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 NEK11Q8NG66 645 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
SF1-201ENST00000227503 GOLGA6L4A6NEF3 574 aa16.62■□□□□ 0.25
SF1-201ENST00000227503 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
SF1-201ENST00000227503 PTH1RQ03431 593 aa16.62■□□□□ 0.25
SF1-201ENST00000227503 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
SF1-201ENST00000227503 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
SF1-201ENST00000227503 LRRC8AQ8IWT6 810 aa16.62■□□□□ 0.25
SF1-201ENST00000227503 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
SF1-201ENST00000227503 SKILP12757 684 aa16.62■□□□□ 0.25
SF1-201ENST00000227503 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
SF1-201ENST00000227503 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
SF1-201ENST00000227503 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
SF1-201ENST00000227503 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
SF1-201ENST00000227503 GORABQ5T7V8 394 aa16.61■□□□□ 0.25
SF1-201ENST00000227503 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
SF1-201ENST00000227503 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
SF1-201ENST00000227503 MTX1Q13505 466 aa16.61■□□□□ 0.25
SF1-201ENST00000227503 HSP90AB4PQ58FF6 505 aa16.61■□□□□ 0.25
SF1-201ENST00000227503 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
SF1-201ENST00000227503 PDRG1Q9NUG6 133 aa16.61■□□□□ 0.25
SF1-201ENST00000227503 KRT85P78386 507 aa16.6■□□□□ 0.25
SF1-201ENST00000227503 STK3Q13188 491 aa16.6■□□□□ 0.25
SF1-201ENST00000227503 C11orf57Q6ZUT1 292 aaPredicted RBP16.6■□□□□ 0.25
SF1-201ENST00000227503 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
SF1-201ENST00000227503 BICD2Q8TD16 824 aa16.6■□□□□ 0.25
SF1-201ENST00000227503 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
SF1-201ENST00000227503 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
SF1-201ENST00000227503 LRRC59Q96AG4 307 aaKnown RBP16.6■□□□□ 0.25
SF1-201ENST00000227503 CALCOCO1Q9P1Z2 691 aa16.6■□□□□ 0.25
SF1-201ENST00000227503 TEFQ10587 303 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 RGPD2P0DJD1 1756 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 CCDC69A6NI79 296 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
SF1-201ENST00000227503 FOSBP53539 338 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 DNAJC2Q99543 621 aaKnown RBP16.59■□□□□ 0.25
SF1-201ENST00000227503 TPCN1Q9ULQ1 816 aa16.59■□□□□ 0.25
SF1-201ENST00000227503 TDRD7Q8NHU6 1098 aaKnown RBP16.58■□□□□ 0.25
SF1-201ENST00000227503 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.25
SF1-201ENST00000227503 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
SF1-201ENST00000227503 TULP2O00295 520 aa16.58■□□□□ 0.24
SF1-201ENST00000227503 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
SF1-201ENST00000227503 NYAP1Q6ZVC0 841 aa16.58■□□□□ 0.24
SF1-201ENST00000227503 FAM53CQ9NYF3 392 aa16.58■□□□□ 0.24
SF1-201ENST00000227503 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
SF1-201ENST00000227503 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
SF1-201ENST00000227503 KCNH5Q8NCM2 988 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
SF1-201ENST00000227503 PGBD1Q96JS3 809 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 SLU7O95391 586 aaKnown RBP16.57■□□□□ 0.24
SF1-201ENST00000227503 CLCN6P51797 869 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 RAD51AP2Q09MP3 1159 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 PAXIP1Q6ZW49 1069 aaPredicted RBP16.57■□□□□ 0.24
SF1-201ENST00000227503 ERO1AQ96HE7 468 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
SF1-201ENST00000227503 MAP3K2Q9Y2U5 619 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 PXDNQ92626 1479 aa16.57■□□□□ 0.24
SF1-201ENST00000227503 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
SF1-201ENST00000227503 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 CYP2C19P33261 490 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 LARP1Q6PKG0 1096 aaKnown RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 EPC1Q9H2F5 836 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 GIGYF1O75420 1035 aaPredicted RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 CCZ1BP86790 482 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 PSME1Q06323 249 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 FEZ2Q9UHY8 353 aaPredicted RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 FHOD1Q9Y613 1164 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 TAF6LQ9Y6J9 622 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 SEC31AO94979 1220 aaKnown RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
SF1-201ENST00000227503 CLSTN2Q9H4D0 955 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 ECHDC1Q9NTX5 307 aa16.56■□□□□ 0.24
SF1-201ENST00000227503 GOLGA6L19H0YKK7 550 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 PPFIA3O75145 1194 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 PLA2G4AP47712 749 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 ST5P78524 1137 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 KSR2Q6VAB6 950 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 SYT10Q6XYQ8 523 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
SF1-201ENST00000227503 ESCO1Q5FWF5 840 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 CCAR2Q8N163 923 aaKnown RBP16.55■□□□□ 0.24
SF1-201ENST00000227503 KCNB2Q92953 911 aa16.55■□□□□ 0.24
SF1-201ENST00000227503 FTOQ9C0B1 505 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■■■□ 23.1
SF1-201ENST00000227503 C9orf78Q9NZ63 289 aaPredicted RBP16.55■□□□□ 0.24
SF1-201ENST00000227503 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
SF1-201ENST00000227503 CCDC171Q6TFL3 1326 aa16.54■□□□□ 0.24
SF1-201ENST00000227503 OVOS2A0A0G2JMS6 1433 aa16.54■□□□□ 0.24
SF1-201ENST00000227503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms