RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 MED1Q15648 1581 aaPredicted RBP23.22■■□□□ 1.31
HOXA11-201ENST00000006015 SRGAP3O43295 1099 aa23.21■■□□□ 1.31
HOXA11-201ENST00000006015 ZNF165P49910 485 aa23.21■■□□□ 1.31
HOXA11-201ENST00000006015 C19orf44Q9H6X5 657 aa23.21■■□□□ 1.31
HOXA11-201ENST00000006015 FAM53CQ9NYF3 392 aa23.21■■□□□ 1.31
HOXA11-201ENST00000006015 ADCK5Q3MIX3 580 aa23.21■■□□□ 1.31
HOXA11-201ENST00000006015 SLFNL1Q499Z3 407 aa23.21■■□□□ 1.31
HOXA11-201ENST00000006015 C1orf167Q5SNV9 1468 aa23.21■■□□□ 1.31
HOXA11-201ENST00000006015 RBM6P78332 1123 aaKnown RBP23.2■■□□□ 1.3
HOXA11-201ENST00000006015 KMT5BQ4FZB7 885 aa23.2■■□□□ 1.3
HOXA11-201ENST00000006015 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
HOXA11-201ENST00000006015 CREBRFQ8IUR6 639 aa23.2■■□□□ 1.3
HOXA11-201ENST00000006015 CABLES1Q8TDN4 633 aa23.2■■□□□ 1.3
HOXA11-201ENST00000006015 ZNF592Q92610 1267 aa23.2■■□□□ 1.3
HOXA11-201ENST00000006015 SPATA32Q96LK8 384 aa23.2■■□□□ 1.3
HOXA11-201ENST00000006015 CCDC144BQ3MJ40 725 aa23.2■■□□□ 1.3
HOXA11-201ENST00000006015 CCDC144CPQ8IYA2 1237 aa23.2■■□□□ 1.3
HOXA11-201ENST00000006015 TTC41PQ6P2S7 1318 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 ADCY9O60503 1353 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 GIGYF1O75420 1035 aaPredicted RBP23.19■■□□□ 1.3
HOXA11-201ENST00000006015 SARM1Q6SZW1 724 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 FERMT3Q86UX7 667 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 NECAB1Q8N987 351 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 ERO1AQ96HE7 468 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 GLRX3O76003 335 aaKnown RBP23.19■■□□□ 1.3
HOXA11-201ENST00000006015 HOXB7P09629 217 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 NYAP1Q6ZVC0 841 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 LRRC8AQ8IWT6 810 aa23.19■■□□□ 1.3
HOXA11-201ENST00000006015 ZNF215Q9UL58 517 aaPredicted RBP23.19■■□□□ 1.3
HOXA11-201ENST00000006015 SLIT3O75094 1523 aa23.18■■□□□ 1.3
HOXA11-201ENST00000006015 PTH1RQ03431 593 aa23.18■■□□□ 1.3
HOXA11-201ENST00000006015 SLC39A6Q13433 755 aa23.18■■□□□ 1.3
HOXA11-201ENST00000006015 PTPN14Q15678 1187 aa23.18■■□□□ 1.3
HOXA11-201ENST00000006015 DNAJC25Q9H1X3 360 aa23.18■■□□□ 1.3
HOXA11-201ENST00000006015 DTNBO60941 627 aa23.17■■□□□ 1.3
HOXA11-201ENST00000006015 ZKSCAN1P17029 563 aaPredicted RBP23.17■■□□□ 1.3
HOXA11-201ENST00000006015 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
HOXA11-201ENST00000006015 LEO1Q8WVC0 666 aaPredicted RBP23.17■■□□□ 1.3
HOXA11-201ENST00000006015 MRFAP1L1Q96HT8 127 aa23.17■■□□□ 1.3
HOXA11-201ENST00000006015 NLRP2Q9NX02 1062 aa23.17■■□□□ 1.3
HOXA11-201ENST00000006015 DBF4Q9UBU7 674 aaPredicted RBP23.17■■□□□ 1.3
HOXA11-201ENST00000006015 TPCN1Q9ULQ1 816 aa23.17■■□□□ 1.3
HOXA11-201ENST00000006015 ERBB3P21860 1342 aa23.17■■□□□ 1.3
HOXA11-201ENST00000006015 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
HOXA11-201ENST00000006015 HSP90AB4PQ58FF6 505 aa23.16■■□□□ 1.3
HOXA11-201ENST00000006015 RNF20Q5VTR2 975 aa23.16■■□□□ 1.3
HOXA11-201ENST00000006015 FAM173BQ6P4H8 233 aa23.16■■□□□ 1.3
HOXA11-201ENST00000006015 CWF19L2Q2TBE0 894 aaKnown RBP23.16■■□□□ 1.3
HOXA11-201ENST00000006015 LMO7Q8WWI1 1683 aa23.16■■□□□ 1.3
HOXA11-201ENST00000006015 AIMP1Q12904 312 aaKnown RBP23.15■■□□□ 1.3
HOXA11-201ENST00000006015 TIGD1Q96MW7 591 aa23.15■■□□□ 1.3
HOXA11-201ENST00000006015 PHRF1Q9P1Y6 1649 aaKnown RBP23.15■■□□□ 1.3
HOXA11-201ENST00000006015 GOLGA6L19H0YKK7 550 aa23.15■■□□□ 1.3
HOXA11-201ENST00000006015 ATF3P18847 181 aa23.15■■□□□ 1.3
HOXA11-201ENST00000006015 NECTIN1Q15223 517 aa23.15■■□□□ 1.3
HOXA11-201ENST00000006015 FBXO38Q6PIJ6 1188 aa23.15■■□□□ 1.3
HOXA11-201ENST00000006015 CHRNA2Q15822 529 aa23.14■■□□□ 1.29
HOXA11-201ENST00000006015 BICD2Q8TD16 824 aa23.14■■□□□ 1.29
HOXA11-201ENST00000006015 RGPD5Q99666 1765 aa23.14■■□□□ 1.29
HOXA11-201ENST00000006015 KIF2AO00139 706 aaPredicted RBP23.13■■□□□ 1.29
HOXA11-201ENST00000006015 NR1I2O75469 434 aa23.13■■□□□ 1.29
HOXA11-201ENST00000006015 CALCOCO1Q9P1Z2 691 aa23.13■■□□□ 1.29
HOXA11-201ENST00000006015 NCAPD2Q15021 1401 aa23.13■■□□□ 1.29
HOXA11-201ENST00000006015 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
HOXA11-201ENST00000006015 USP27XA6NNY8 438 aa23.13■■□□□ 1.29
HOXA11-201ENST00000006015 CDK11BP21127 795 aaKnown RBP23.13■■□□□ 1.29
HOXA11-201ENST00000006015 PSMA5P28066 241 aa23.13■■□□□ 1.29
HOXA11-201ENST00000006015 KCNJ4P48050 445 aa23.13■■□□□ 1.29
HOXA11-201ENST00000006015 ANKRD1Q15327 319 aa23.13■■□□□ 1.29
HOXA11-201ENST00000006015 SLU7O95391 586 aaKnown RBP23.12■■□□□ 1.29
HOXA11-201ENST00000006015 ELF2Q15723 593 aa23.12■■□□□ 1.29
HOXA11-201ENST00000006015 KCND1Q9NSA2 647 aa23.12■■□□□ 1.29
HOXA11-201ENST00000006015 TMEM94Q12767 1356 aa23.12■■□□□ 1.29
HOXA11-201ENST00000006015 SKILP12757 684 aa23.12■■□□□ 1.29
HOXA11-201ENST00000006015 IQCB1Q15051 598 aa23.12■■□□□ 1.29
HOXA11-201ENST00000006015 CREB3L3Q68CJ9 461 aa23.12■■□□□ 1.29
HOXA11-201ENST00000006015 C9orf78Q9NZ63 289 aaPredicted RBP23.12■■□□□ 1.29
HOXA11-201ENST00000006015 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
HOXA11-201ENST00000006015 TFIP11Q9UBB9 837 aaKnown RBP23.11■■□□□ 1.29
HOXA11-201ENST00000006015 RBM8AQ9Y5S9 174 aaKnown RBP23.11■■□□□ 1.29
HOXA11-201ENST00000006015 IRX5P78411 483 aaPredicted RBP23.11■■□□□ 1.29
HOXA11-201ENST00000006015 NFATC2IPQ8NCF5 419 aa23.11■■□□□ 1.29
HOXA11-201ENST00000006015 KSR2Q6VAB6 950 aa23.1■■□□□ 1.29
HOXA11-201ENST00000006015 PGBD1Q96JS3 809 aa23.1■■□□□ 1.29
HOXA11-201ENST00000006015 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.1■■□□□ 1.29
HOXA11-201ENST00000006015 PA2G4Q9UQ80 394 aaKnown RBP23.1■■□□□ 1.29
HOXA11-201ENST00000006015 V9GYY5 206 aaPredicted RBP23.1■■□□□ 1.29
HOXA11-201ENST00000006015 HEG1Q9ULI3 1381 aa23.09■■□□□ 1.29
HOXA11-201ENST00000006015 CCDC69A6NI79 296 aa23.09■■□□□ 1.29
HOXA11-201ENST00000006015 CSB-PGBD3P0DP91 1061 aa23.09■■□□□ 1.29
HOXA11-201ENST00000006015 CCZ1BP86790 482 aa23.09■■□□□ 1.29
HOXA11-201ENST00000006015 CCZ1P86791 482 aaPredicted RBP23.09■■□□□ 1.29
HOXA11-201ENST00000006015 LARP1Q6PKG0 1096 aaKnown RBP23.09■■□□□ 1.29
HOXA11-201ENST00000006015 CCAR2Q8N163 923 aaKnown RBP23.09■■□□□ 1.29
HOXA11-201ENST00000006015 GPATCH3Q96I76 525 aa23.09■■□□□ 1.29
HOXA11-201ENST00000006015 ALDH8A1Q9H2A2 487 aaPredicted RBP23.09■■□□□ 1.29
HOXA11-201ENST00000006015 MYL6BP14649 208 aa23.08■■□□□ 1.29
HOXA11-201ENST00000006015 PIP4K2AP48426 406 aaPredicted RBP23.08■■□□□ 1.29
HOXA11-201ENST00000006015 OS9Q13438 667 aaPredicted RBP23.08■■□□□ 1.29
HOXA11-201ENST00000006015 STX1AQ16623 288 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms