RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ACTA1P68133 377 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 LSM11P83369 360 aaKnown RBP eCLIP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 TIGD6Q17RP2 521 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 COL28A1Q2UY09 1125 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 NDUFAF6Q330K2 333 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 GPR107Q5VW38 600 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 H3F3CQ6NXT2 135 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 FAM199XQ6PEV8 388 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 DHRS13Q6UX07 377 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 GDPGP1Q6ZNW5 385 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 LINC00299Q6ZSB3 139 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 MEPCEQ7L2J0 689 aaKnown RBP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 SLC46A3Q7Z3Q1 461 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 NANOGNBQ7Z5D8 188 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 PPP1R32Q7Z5V6 425 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 RPS19BP1Q86WX3 136 aaKnown RBP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 TMEM156Q8N614 296 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 C10orf53Q8N6V4 93 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 SCAIQ8N9R8 606 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 HAVCR2Q8TDQ0 301 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 DUSP19Q8WTR2 217 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 KIAA1143Q96AT1 154 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 TMIGD2Q96BF3 282 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 ZBTB8AQ96BR9 441 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 DDIT4LQ96D03 193 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 RNFT2Q96EX2 444 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 SH3YL1Q96HL8 342 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 FER1L6-AS2Q96M78 137 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 FRMD6Q96NE9 622 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 ASPNQ9BXN1 380 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 POTEKPQ9BYX7 375 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 YIPF3Q9GZM5 350 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 AKIRIN1Q9H9L7 192 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 MCCC2Q9HCC0 563 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 PARD6AQ9NPB6 346 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 NRIP3Q9NQ35 241 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 SACM1LQ9NTJ5 587 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 HPF1Q9NWY4 346 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 EXOGQ9Y2C4 368 aaKnown RBP8.85□□□□□ -0.99
PHGDH-215ENST00000641371 TMED7Q9Y3B3 224 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 MPDZO75970 2070 aa8.85□□□□□ -0.99
PHGDH-215ENST00000641371 IGKV1D-42A0A075B6H8 117 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 TRAV27A0A087WT01 109 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 NPIPB13A6NJU9 1138 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 NPIPB4C9JG80 1138 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 AGRPO00253 132 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 OIP5O43482 229 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 AHCYL1O43865 530 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 SUSD5O60279 629 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 NPIPB7O75200 414 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 INMTO95050 263 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 CH25HO95992 272 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 PRKCAP17252 672 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 TGM1P22735 817 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 GTF2E2P29084 291 aaKnown RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 RBMS1P29558 406 aaKnown RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 C21orf33P30042 268 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 OTX2P32243 289 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 ATP6V1E1P36543 226 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 RNF144AP50876 292 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 BLVRAP53004 296 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 MLLT11Q13015 90 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 SGCBQ16585 318 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 GLYR1Q49A26 553 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 ALG10Q5BKT4 473 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 FAM205BPQ63HN1 556 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 SLC22A10Q63ZE4 541 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 NIPAL3Q6P499 406 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 TMPRSS11AQ6ZMR5 421 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 TIPARPQ7Z3E1 657 aaKnown RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 POMGNT2Q8NAT1 580 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 ZNF248Q8NDW4 579 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 PRSS33Q8NF86 280 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 OR4K17Q8NGC6 315 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 OR52N1Q8NH53 320 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 OR51A7Q8NH64 312 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 MFSD8Q8NHS3 518 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 PAQR8Q8TEZ7 354 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 THAP3Q8WTV1 239 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 PMEPA1Q969W9 287 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 C12orf43Q96C57 262 aaKnown RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 YIPF6Q96EC8 236 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 ERMAPQ96PL5 475 aaPredicted RBP8.84□□□□□ -0.99
PHGDH-215ENST00000641371 TNFRSF13CQ96RJ3 184 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 FUNDC2Q9BWH2 189 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 ZNF160Q9HCG1 818 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 AMBNQ9NP70 447 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 CHRNA9Q9UGM1 479 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 MOKQ9UQ07 419 aa8.84□□□□□ -0.99
PHGDH-215ENST00000641371 PROB1E7EW31 1015 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 H3BMQ9 156 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 M0R129 80 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 CCRL2O00421 344 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 SEC14L5O43304 696 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 GDF9O60383 454 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 FZD7O75084 574 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 TNFSF15O95150 251 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 OR6A2O95222 327 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 PPP1R3DO95685 299 aa8.83□□□□□ -1
PHGDH-215ENST00000641371 IGHA1P01876 353 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms