RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 RAET1EQ8TD07 263 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 ZNF721Q8TF20 911 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 SPRYD4Q8WW59 207 aaPredicted RBP2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 FAM3CQ92520 227 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 ARPC1AQ92747 370 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 TIMD4Q96H15 378 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 SEC22AQ96IW7 307 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 PLA2G2FQ9BZM2 168 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 POLR1EQ9GZS1 481 aaKnown RBP2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 TPK1Q9H3S4 243 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 DMAP1Q9NPF5 467 aaPredicted RBP2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 AK6Q9Y3D8 172 aaKnown RBP2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 GPRASP1Q5JY77 1395 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 PDS5BQ9NTI5 1447 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 SLIT3O75094 1523 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 PPIAL4EA0A075B759 164 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 A0A1B0GUS0 222 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 PPIAL4DF5H284 164 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 AGPAT2O15120 278 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 AIREO43918 545 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 MFN2O95140 757 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 LRATO95237 230 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 PPIAL4FP0DN26 164 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 TDGF1P13385 188 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 IGFBP3P17936 291 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 CXCR2P25025 360 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 OTX2P32243 289 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 TDGF1P3P51864 188 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 MNAT1P51948 309 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 ZNF136P52737 540 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 CRISP3P54108 245 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 ACTA1P68133 377 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 NUCB2P80303 420 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 IL1RL1Q01638 556 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 CNTN2Q02246 1040 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 TIGD3Q6B0B8 471 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 OR52W1Q6IF63 320 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 LRRC31Q6UY01 552 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 MOB3BQ86TA1 216 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 LRRC43Q8N309 656 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 FADS6Q8N9I5 356 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 STXBP6Q8NFX7 210 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 OR9G1Q8NH87 305 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 ZNF596Q8TC21 504 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 GIMAP1Q8WWP7 306 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 FCRL1Q96LA6 429 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 RIT2Q99578 217 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 ALG12Q9BV10 488 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 DPH5Q9H2P9 285 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 LHX9Q9NQ69 397 aa2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 SF3B1O75533 1304 aaKnown RBP eCLIP2.82□□□□□ -1.96
SCAMP1-205ENST00000614488 TAPBPO15533 448 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 OR1F1O43749 312 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 NEBLO76041 1014 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 IGHG4P01861 327 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 COX5AP20674 150 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 CALCRP30988 508 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 GLP1RP43220 463 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 RPS9P46781 194 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 RPS14P62263 151 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 SNTB2Q13425 540 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 ZNF621Q6ZSS3 439 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 ZNF571Q7Z3V5 609 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 FANK1Q8TC84 345 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 STARD8Q92502 1023 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 PAGE5Q96GU1 130 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 SH3YL1Q96HL8 342 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 C7orf34Q96L11 122 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 TSNARE1Q96NA8 513 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 HDHD3Q9BSH5 251 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 TMEM117Q9H0C3 514 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 MEAF6Q9HAF1 191 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 CCL28Q9NRJ3 127 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 SLC25A37Q9NYZ2 338 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 ACTR3BQ9P1U1 418 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 ZNF282Q9UDV7 671 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 ODF2LQ9ULJ1 636 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 GAKO14976 1311 aa2.81□□□□□ -1.96
SCAMP1-205ENST00000614488 HIP1O00291 1037 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 STAMBPO95630 424 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 POLR2EP19388 210 aaKnown RBP2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 VDAC2P45880 294 aaPredicted RBP2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 NMUP48645 174 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 PJVKQ0ZLH3 352 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 ATP6AP1Q15904 470 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 CCDC57Q2TAC2 916 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 SLC25A52Q3SY17 297 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 PARP15Q460N3 678 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 C12orf56Q8IXR9 622 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 TMEM61Q8N0U2 210 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 CLEC4FQ8N1N0 589 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 CATSPER1Q8NEC5 780 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 SLC22A8Q8TCC7 542 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 C4orf36Q96KX1 117 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 CEP170P1Q96L14 293 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 TUBGCP2Q9BSJ2 902 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 ZNF416Q9BWM5 594 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 RSPO3Q9BXY4 272 aaPredicted RBP2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 GNPTGQ9UJJ9 305 aa2.8□□□□□ -1.96
SCAMP1-205ENST00000614488 TRAF3IP3Q9Y228 551 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms