RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MUCL1Q96DR8 90 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 NEURL3Q96EH8 262 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 BTBD2Q9BX70 525 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 RAD21L1Q9H4I0 556 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 CBLN4Q9NTU7 201 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 GID8Q9NWU2 228 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 PCDHB14Q9Y5E9 798 aa14.49□□□□□ -0.09
SHKBP1-215ENST00000597649 OR5H1A6NKK0 313 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 DUXAA6NLW8 204 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 EVPLLA8MZ36 301 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 FBP2O00757 339 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 AIM2O14862 343 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 SMAD9O15198 467 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 CYTIPO60759 359 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 NUDT14O95848 222 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 GGT1P19440 569 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 PPIBP23284 216 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 THBS2P35442 1172 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 P2RX1P51575 399 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 POU6F2P78424 691 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 RASGEF1BQ0VAM2 473 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 RAB35Q15286 201 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 GTDC1Q4AE62 458 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 LRIF1Q5T3J3 769 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 SAXO2Q658L1 398 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 CYB5R2Q6BCY4 276 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 CDC73Q6P1J9 531 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 PNPT1Q8TCS8 783 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 C10orf105Q8TEF2 133 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 CDS1Q92903 461 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 RCN3Q96D15 328 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 DHRS9Q9BPW9 319 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 EFCAB1Q9HAE3 211 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 TPT1P8Q9HAU6 139 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 GPATCH2Q9NW75 528 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 SLAMF8Q9P0V8 285 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 KLHL9Q9P2J3 617 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 GPC6Q9Y625 555 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 KCNE3Q9Y6H6 103 aa14.48□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC35F4A4IF30 521 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 GJE1A6NN92 205 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 CLIC1O00299 241 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 LY6HO94772 140 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 H6PDO95479 791 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 AGR2O95994 175 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 NPPAP01160 153 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC25A16P16260 332 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 ZNF16P17020 682 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 NTF4P34130 210 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 CRATP43155 626 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 KHKP50053 298 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 RPS26P62854 115 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 TXNL4AP83876 142 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 TRMT5Q32P41 509 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC25A53Q5H9E4 307 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 IL17RELQ6ZVW7 336 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 P2RY8Q86VZ1 359 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 RNF130Q86XS8 419 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 MUC15Q8N387 334 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 FITM2Q8N6M3 262 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 RADILQ96JH8 1075 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 OR7D2Q96RA2 312 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 STACQ99469 402 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 SHARPINQ9H0F6 387 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 OR51I1Q9H343 314 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 PIGUQ9H490 435 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC6A13Q9NSD5 602 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 LPAR3Q9UBY5 353 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 TAGLN3Q9UI15 199 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 CORO2BQ9UQ03 480 aa14.47□□□□□ -0.09
SHKBP1-215ENST00000597649 A0A1W2PR80 420 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 ZNF724A8MTY0 619 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 ETV2O00321 342 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 LMX1BO60663 402 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 IGHV3-9P01782 118 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 IGFBP5P24593 272 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 CD40P25942 277 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 ZNF83P51522 516 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 MNAT1P51948 309 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 KRT72Q14CN4 511 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 ATAD3BQ5T9A4 648 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 FAM91A1Q658Y4 838 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 TNFAIP8L2Q6P589 184 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC22A25Q6T423 547 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 DLEU7Q6UYE1 221 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 TRPM8Q7Z2W7 1104 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 OR52N5Q8NH56 324 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 XAGE5Q8WWM1 108 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 FAM168AQ92567 244 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 LRRC58Q96CX6 371 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 AURKBQ96GD4 344 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 MRGPRX4Q96LA9 322 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 CGREF1Q99674 301 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 SH3GL1Q99961 368 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 THUMPD3Q9BV44 507 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 DUSP22Q9NRW4 184 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 EXD2Q9NVH0 621 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 SLC25A37Q9NYZ2 338 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 VAPAQ9P0L0 249 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms