RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 S100PBPQ96BU1 408 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 PIK3IP1Q96FE7 263 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 ZNF317Q96PQ6 595 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 WFDC6Q9BQY6 131 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 KAT8Q9H7Z6 458 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 EMC3Q9P0I2 261 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 ZNF469Q96JG9 3925 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 ITPR3Q14573 2671 aa16.37■□□□□ 0.21
SHKBP1-202ENST00000593764 A8MVM7 634 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 MFN2O95140 757 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 ATE1O95260 518 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 DNASE1P24855 282 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 HTR2AP28223 471 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 IDUAP35475 653 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 MDH1P40925 334 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 GZMMP51124 257 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 DMTNQ08495 405 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 ITGADQ13349 1161 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 CEACAM7Q14002 265 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 CAPRIN1Q14444 709 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 SLC17A1Q14916 467 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 PAQR6Q6TCH4 344 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 NET1Q7Z628 596 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 LSMEM1Q8N8F7 131 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 C11orf65Q8NCR3 313 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 MBD6Q96DN6 1003 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 ZNF607Q96SK3 696 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 FOXC2Q99958 501 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 PRR14Q9BWN1 585 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 CXXC4Q9H2H0 198 aa16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 NOSIPQ9Y314 301 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-202ENST00000593764 GPR171O14626 319 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 ATP8B1O43520 1251 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 AKR7A3O95154 331 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 CNOT4O95628 575 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 RAF1P04049 648 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 GPIP06744 558 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 EGR4Q05215 589 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 RBBP4Q09028 425 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 OR7A5Q15622 319 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 CYP51A1Q16850 503 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 NANOGP8Q6NSW7 305 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 C6orf89Q6UWU4 347 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 ZNF100Q8IYN0 542 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 TMEM99Q8N816 258 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 STK35Q8TDR2 534 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 KISS1RQ969F8 398 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 NAA11Q9BSU3 229 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 NANOGQ9H9S0 305 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 MRGBPQ9NV56 204 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 KLHL14Q9P2G3 628 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 EDARQ9UNE0 448 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 FLVCR1Q9Y5Y0 555 aa16.35■□□□□ 0.21
SHKBP1-202ENST00000593764 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 PRORSD1PA6NEY8 169 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 FXYD1O00168 92 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 TPST2O60704 377 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 SERPINB7O75635 380 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 CD53P19397 219 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 COX5AP20674 150 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 IGHV1-2P23083 117 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 ADSLP30566 484 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 P2RY4P51582 365 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 TRMT5Q32P41 509 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 BEX5Q5H9J7 111 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 C1orf140Q5VVS0 124 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 BHLHA15Q7RTS1 189 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 WFDC8Q8IUA0 241 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 ARMC8Q8IUR7 673 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 OR10A6Q8NH74 314 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 C10orf82Q8WW14 230 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 ANGPT4Q9Y264 503 aa16.34■□□□□ 0.21
SHKBP1-202ENST00000593764 MED13LQ71F56 2210 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 A0A1B0GWA3 101 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 AQP7P3A6NL99 342 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 M0QX08 132 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 LYZL6O75951 148 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 IGHV3-9P01782 118 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 IL32P24001 234 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 CYLC2Q14093 348 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 KEAP1Q14145 624 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 TAB1Q15750 504 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 DUSP7Q16829 419 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 COQ5Q5HYK3 327 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 OTUD3Q5T2D3 398 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 FBXW9Q5XUX1 488 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 SEZ6L2Q6UXD5 910 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 ZIC4Q8N9L1 334 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 SMYD1Q8NB12 490 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 BHLHE22Q8NFJ8 381 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 GPR32P1Q8NGA4 272 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 OR52E4Q8NGH9 312 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 HSD17B8Q92506 261 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 APH1AQ96BI3 265 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 LRRC58Q96CX6 371 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 PTDSS2Q9BVG9 487 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 C12orf10Q9HB07 376 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 CADP27708 2225 aa16.33■□□□□ 0.2
SHKBP1-202ENST00000593764 LOC100653049A0A140TA62 436 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms