RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 FRS3O43559 492 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 AKR7A3O95154 331 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 GPIP06744 558 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 FOSL1P15407 271 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 ACAA2P42765 397 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 PRRC2AP48634 2157 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 MAP2K6P52564 334 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 HOXC5Q00444 222 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 BSPH1Q075Z2 132 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 FAPQ12884 760 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 NCMAPQ5T1S8 102 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 OTUD3Q5T2D3 398 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 GCNT6Q5T4J0 391 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 YTHDF3Q7Z739 585 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 SERPINA11Q86U17 422 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 GPAT4Q86UL3 456 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 HEATR5AQ86XA9 2040 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 KRTAP1-3Q8IUG1 177 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 NFKBIDQ8NI38 313 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 BBS10Q8TAM1 723 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 C18orf12Q96KH6 178 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 Q96MF0 132 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 SIKE1Q9BRV8 207 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 TMEM204Q9BSN7 226 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 TAPBPLQ9BX59 468 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 IKZF5Q9H5V7 419 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 CXorf56Q9H5V9 222 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 DLL4Q9NR61 685 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 ASB6Q9NWX5 421 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 ADPRHL2Q9NX46 363 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 UPB1Q9UBR1 384 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 LAMP3Q9UQV4 416 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 SLC9A8Q9Y2E8 581 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 ITPR3Q14573 2671 aa11.22□□□□□ -0.61
NPLOC4-213ENST00000573519 TRBV5-3A0A0A0MS03 114 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 A8MVM7 634 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 PGM3O95394 542 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 CNOT4O95628 575 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 TROVE2P10155 538 aaKnown RBP eCLIP11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 COX5AP20674 150 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 PPIBP23284 216 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 NTF4P34130 210 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 PTH2RP49190 550 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 ARFIP2P53365 341 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 SLC16A1P53985 500 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 IRX1P78414 480 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 H3F3AP84243 136 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 ZSWIM7Q19AV6 140 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 TIMM23BQ5SRD1 257 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 C9orf135Q5VTT2 229 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 ADAM5Q6NVV9 412 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 PAQR6Q6TCH4 344 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 DLEU7Q6UYE1 221 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 ZNF433Q8N7K0 673 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 TMEM99Q8N816 258 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 ZNF611Q8N823 705 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 KBTBD8Q8NFY9 601 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 OR52N5Q8NH56 324 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 NEUROG1Q92886 237 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 FBXW5Q969U6 566 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 SMR3AQ99954 134 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 BCL2L10Q9HD36 194 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 MED4Q9NPJ6 270 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 TMEM45AQ9NWC5 275 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 PARPBPQ9NWS1 579 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 RPS6KB2Q9UBS0 482 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 LEF1Q9UJU2 399 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 CHST2Q9Y4C5 530 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 FLVCR1Q9Y5Y0 555 aa11.21□□□□□ -0.61
NPLOC4-213ENST00000573519 ZNF469Q96JG9 3925 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 A0A1W2PR80 420 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 DPRXA6NFQ7 191 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 LIPT2A6NK58 231 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 OR5H1A6NKK0 313 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 EVPLLA8MZ36 301 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 INHBBP09529 407 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 BMP2P12643 396 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 CDK6Q00534 326 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC17A1Q14916 467 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 PRAMEF8Q5VWM4 474 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 PRAMEF7Q5VXH5 474 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 TMEM225Q6GV28 225 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 Q71RC1 249 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 DHDDSQ86SQ9 333 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 KRT73Q86Y46 540 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 OR52E4Q8NGH9 312 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 LILRB1Q8NHL6 650 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 C3orf49Q96BT1 292 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 CPPED1Q9BRF8 314 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 GSX2Q9BZM3 304 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 TAS2R16Q9NYV7 291 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 CORO2BQ9UQ03 480 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 NDUFAF1Q9Y375 327 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 AKAP6Q13023 2319 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
NPLOC4-213ENST00000573519 ELOA3DA6NLF2 546 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 H7C1Q1 480 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ABCD4O14678 606 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 SMAD7O15105 426 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms