RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 WIF1Q9Y5W5 379 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 COMMD3-BMI1R4GMX3 469 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 EXPH5Q8NEV8 1989 aa12.54□□□□□ -0.4
TPM1-215ENST00000558868 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 A8MVM7 634 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 ADAM10O14672 748 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 RAB36O95755 333 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 ZNF3P17036 446 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 NOS3P29474 1203 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 HTR1FP30939 366 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 RPL4P36578 427 aaKnown RBP12.53□□□□□ -0.4
TPM1-215ENST00000558868 CASP3P42574 277 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 MASP1P48740 699 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 ZNF41P51814 821 aaPredicted RBP12.53□□□□□ -0.4
TPM1-215ENST00000558868 CDH11P55287 796 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 FXYD6P3P58550 94 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 IRF3Q14653 427 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 TOMM34Q15785 309 aaPredicted RBP12.53□□□□□ -0.4
TPM1-215ENST00000558868 AADACL4Q5VUY2 407 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 GPR107Q5VW38 600 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 JMJD6Q6NYC1 403 aaPredicted RBP12.53□□□□□ -0.4
TPM1-215ENST00000558868 B3GNT6Q6ZMB0 384 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 THSD4Q6ZMP0 1018 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 CXXC5Q7LFL8 322 aaKnown RBP12.53□□□□□ -0.4
TPM1-215ENST00000558868 ZNF367Q7RTV3 350 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 TMEM156Q8N614 296 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 P4HTMQ9NXG6 502 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 IL20RAQ9UHF4 553 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 ERGIC3Q9Y282 383 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 HIF3AQ9Y2N7 669 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 GPR52Q9Y2T5 361 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 ASPMQ8IZT6 3477 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 HEATR5AQ86XA9 2040 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 MAST4O15021 2626 aa12.53□□□□□ -0.4
TPM1-215ENST00000558868 SPAARA0A1B0GVQ0 90 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 PRR23D1E9PI22 279 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 ETV2O00321 342 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 IMPA2O14732 288 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 TERTO14746 1132 aaKnown RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 ARPC3O15145 178 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 OR2T1O43869 369 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 GMFGO60234 142 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 SUSD5O60279 629 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 INMTO95050 263 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 PPP1R3DO95685 299 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 CELA2AP08217 269 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 PRR23D2P0DMB1 279 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 PRKCAP17252 672 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 PSMB9P28065 219 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 C21orf33P30042 268 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 MTNR1AP48039 350 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 MLLT10P55197 1068 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 GP2P55259 537 aaKnown RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 RPS4XP62701 263 aaKnown RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 GABREP78334 506 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 MFSD13AQ14CX5 517 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 H3F3CQ6NXT2 135 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 IL20RBQ6UXL0 311 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 MAMDC2Q7Z304 686 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 AMER2Q8N7J2 671 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 RAB2BQ8WUD1 216 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 ISOC1Q96CN7 298 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 MRGPRX4Q96LA9 322 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 SGCZQ96LD1 299 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 ERMAPQ96PL5 475 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 GPX7Q96SL4 187 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 DOK1Q99704 481 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 YIPF3Q9GZM5 350 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 PTGES2Q9H7Z7 377 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 GALNT9Q9HCQ5 603 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 FGF20Q9NP95 211 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 HPF1Q9NWY4 346 aa12.52□□□□□ -0.41
TPM1-215ENST00000558868 DIMT1Q9UNQ2 313 aaKnown RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 CHCHD2Q9Y6H1 151 aaPredicted RBP12.52□□□□□ -0.41
TPM1-215ENST00000558868 A0A087WZY1 265 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 PCNX2A6NKB5 2137 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 ZNF208O43345 1280 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 AHSA1O95433 338 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 ASAH2BP0C7U1 165 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 CEACAM1P13688 526 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 MYL12AP19105 171 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 CCNA2P20248 432 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 FKBP2P26885 142 aaKnown RBP12.51□□□□□ -0.41
TPM1-215ENST00000558868 GSTT1P30711 240 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 PTGDSP41222 190 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 EGR4Q05215 589 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 FHL1Q13642 323 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 C1DQ13901 141 aaKnown RBP12.51□□□□□ -0.41
TPM1-215ENST00000558868 SLC25A53Q5H9E4 307 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 SLC35F1Q5T1Q4 408 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 FAM69AQ5T7M9 428 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 SLC22A10Q63ZE4 541 aa12.51□□□□□ -0.41
TPM1-215ENST00000558868 MEPCEQ7L2J0 689 aaKnown RBP12.51□□□□□ -0.41
TPM1-215ENST00000558868 NANOGNBQ7Z5D8 188 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms