RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 BTRCQ9Y297 605 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 AUP1Q9Y679 476 aa3.96□□□□□ -1.78
SSX2IP-208ENST00000490476 IGHV4-30-2A0A087WSY4 118 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ARHGEF33A8MVX0 844 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ARHGEF9O43307 516 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 BUB1O43683 1085 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 STK17BO94768 372 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ANXA4P09525 319 aaPredicted RBP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 HMGA1P17096 107 aaKnown RBP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 TNNI3P19429 210 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 PTPN6P29350 595 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 DLSTP36957 453 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 HERVK_113P63132 956 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ERVK-8P63133 956 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 SRPXP78539 464 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 NAAAQ02083 359 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 C16orf72Q14CZ0 275 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 TRIP10Q15642 601 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 HAGHQ16775 308 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ZNF699Q32M78 642 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 BEND6Q5SZJ8 279 aaPredicted RBP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 RIPPLY2Q5TAB7 128 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 AGAP7PQ5VUJ5 663 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 CCDC71Q8IV32 467 aaPredicted RBP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 LMNTD2Q8IXW0 634 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ARFGAP2Q8N6H7 521 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ZNF781Q8N8C0 355 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 SAMD12Q8N8I0 201 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ZNRF1Q8ND25 227 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ZNF540Q8NDQ6 660 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 OR52J3Q8NH60 311 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 NABP1Q96AH0 204 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 DTNBP1Q96EV8 351 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 VPS39Q96JC1 886 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 RAB11FIP5Q9BXF6 653 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ERVK-6Q9BXR3 956 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 FGFBP2Q9BYJ0 223 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 PARLQ9H300 379 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 RNF41Q9H4P4 317 aaPredicted RBP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 KAT8Q9H7Z6 458 aaKnown RBP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 Q9HAA7 133 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 IL1RL2Q9HB29 575 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ELL3Q9HB65 397 aaPredicted RBP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 ADGRL4Q9HBW9 690 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 CENPMQ9NSP4 180 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 THYN1Q9P016 225 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 GCNT4Q9P109 453 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 LAMP5Q9UJQ1 280 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 MFHAS1Q9Y4C4 1052 aa3.95□□□□□ -1.78
SSX2IP-208ENST00000490476 IGKV6-21A0A0C4DH24 114 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 TEX48A0A1B0GUV7 120 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 H0YL77 283 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 CYB561D2O14569 222 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 SNAP91O60641 907 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 POP4O95707 220 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 MBD3O95983 291 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 GOT2P00505 430 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 OAS1P00973 400 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 PCCBP05166 539 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 EPB41P11171 864 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 UGT1A4P22310 534 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 ADRA1AP35348 466 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 CAPGP40121 348 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 PTGFRP43088 359 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 HTR5AP47898 357 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 TUFMP49411 452 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 SLC7A2P52569 658 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 CCL7P80098 99 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 ZFP36L1Q07352 338 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 NCBP1Q09161 790 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 ELP6Q0PNE2 266 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 EXOSC2Q13868 293 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 ZSWIM7Q19AV6 140 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 DEFB133Q30KQ1 61 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 VAX1Q5SQQ9 334 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 RHBDD2Q6NTF9 364 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 SLC25A24Q6NUK1 477 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 NUFIP2Q7Z417 695 aaKnown RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 RANBP3LQ86VV4 465 aaPredicted RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 CDR2LQ86X02 465 aaPredicted RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 CARM1Q86X55 608 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 FAM131BQ86XD5 332 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 STKLD1Q8NE28 680 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 IPMKQ8NFU5 416 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 OR1B1Q8NGR6 318 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 LRRC15Q8TF66 581 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 LHX4Q969G2 390 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 C11orf52Q96A22 123 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 PRICKLE1Q96MT3 831 aaPredicted RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 TSPAN18Q96SJ8 248 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 OPRPNQ99935 248 aaPredicted RBP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 FEM1AQ9BSK4 669 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 SYT11Q9BT88 431 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 TPPP3Q9BW30 176 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 DDA1Q9BW61 102 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 RIBC2Q9H4K1 309 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 NRBP2Q9NSY0 501 aa3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.94□□□□□ -1.78
SSX2IP-208ENST00000490476 ATP6V1HQ9UI12 483 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms