RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 BCL2L10Q9HD36 194 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ASB6Q9NWX5 421 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 ADPRHL2Q9NX46 363 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 POU2F3Q9UKI9 436 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 RNF115Q9Y4L5 304 aa8.1□□□□□ -1.11
HDAC6-232ENST00000489053 NUP214P35658 2090 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-232ENST00000489053 DSPPQ9NZW4 1301 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 NF1P21359 2839 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 IGKV3D-15A0A087WSY6 115 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 ARAFP10398 606 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 PNMTP11086 282 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 ADSLP30566 484 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 ARFIP2P53365 341 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 MVDP53602 400 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 NKX6-1P78426 367 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 FAPQ12884 760 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 C1DQ13901 141 aaKnown RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 CYLC2Q14093 348 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 PPA1Q15181 289 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 TESK1Q15569 626 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 TSC22D1Q15714 1073 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 TAB1Q15750 504 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 PAGE3Q5JUK9 113 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 INTS11Q5TA45 600 aaKnown RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 C1orf140Q5VVS0 124 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 METTL21CQ5VZV1 264 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 OR7E24Q6IFN5 339 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 PAQR6Q6TCH4 344 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 AAED1Q7RTV5 226 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 P2RY8Q86VZ1 359 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 TGIF2LYQ8IUE0 185 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 FUNDC1Q8IVP5 155 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 CCDC103Q8IW40 242 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 SLC30A8Q8IWU4 369 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 GABRG1Q8N1C3 465 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 DEPDC4Q8N2C3 294 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 CLIP4Q8N3C7 705 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 C10orf53Q8N6V4 93 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 HIPK4Q8NE63 616 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 OR52E4Q8NGH9 312 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 DNAJA4Q8WW22 397 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 STON2Q8WXE9 905 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 SLC35B4Q969S0 331 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 GTPBP3Q969Y2 492 aaKnown RBP8.09□□□□□ -1.11
HDAC6-232ENST00000489053 ZNF524Q96C55 264 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 SLC25A36Q96CQ1 311 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 EPYCQ99645 322 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 SH3GL1Q99961 368 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM120AQ9BXJ8 343 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 FAIMQ9NVQ4 179 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 TAS2R16Q9NYV7 291 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 PRSS50Q9UI38 385 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 MED12LQ86YW9 2145 aa8.09□□□□□ -1.11
HDAC6-232ENST00000489053 LIPT2A6NK58 231 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 FRS3O43559 492 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 AKAP8O43823 692 aaKnown RBP8.08□□□□□ -1.12
HDAC6-232ENST00000489053 GCM2O75603 506 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-232ENST00000489053 RAD51DO75771 328 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 SASH3O75995 380 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 AKR7A3O95154 331 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 VAMP5O95183 116 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 THBDP07204 575 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 PRG2P13727 222 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 NQO1P15559 274 aaKnown RBP8.08□□□□□ -1.12
HDAC6-232ENST00000489053 CD53P19397 219 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 KLK2P20151 261 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 SLC16A1P53985 500 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 MTPNP58546 118 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 HOXC5Q00444 222 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 RBBP4Q09028 425 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 SF3A3Q12874 501 aaKnown RBP eCLIP8.08□□□□□ -1.125e-7■■■□□ 17.5
HDAC6-232ENST00000489053 BNIP2Q12982 314 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 TIMM23BQ5SRD1 257 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 SHEQ5VZ18 495 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 C5orf46Q6UWT4 87 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 PCYOX1LQ8NBM8 494 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 OR9K2Q8NGE7 335 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 STK35Q8TDR2 534 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 TSPEARQ8WU66 669 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 AKAP1Q92667 903 aaKnown RBP eCLIP8.08□□□□□ -1.12
HDAC6-232ENST00000489053 SLC38A4Q969I6 547 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 PERPQ96FX8 193 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 HS3ST6Q96QI5 342 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 CGREF1Q99674 301 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 KCNS3Q9BQ31 491 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 ECSITQ9BQ95 431 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 CXXC4Q9H2H0 198 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 ALG2Q9H553 416 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 TMEM38AQ9H6F2 299 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 EVA1AQ9H8M9 152 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 MED4Q9NPJ6 270 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 FGFR1OP2Q9NVK5 253 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 SLC25A37Q9NYZ2 338 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 VAPAQ9P0L0 249 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 SLAMF8Q9P0V8 285 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 TESQ9UGI8 421 aaKnown RBP8.08□□□□□ -1.12
HDAC6-232ENST00000489053 RASD1Q9Y272 281 aa8.08□□□□□ -1.12
HDAC6-232ENST00000489053 ZC3H12DA2A288 527 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms