RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CRNNQ9UBG3 495 aaPredicted RBP13.96□□□□□ -0.17
DDX56-210ENST00000479440 KCNE5Q9UJ90 142 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 MKLN1Q9UL63 735 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 EMCNQ9ULC0 261 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 SPEF1Q9Y4P9 236 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 ARPC4-TTLL3A0A0A6YYG9 625 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 ZNF587BE7ETH6 402 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 CFLARO15519 480 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 LINC00032P0C843 101 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 CECR9P0C854 216 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 CCNA2P20248 432 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 NPR2P20594 1047 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 MATN1P21941 496 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 RYKP34925 604 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 RPS26P62854 115 aaKnown RBP13.95□□□□□ -0.18
DDX56-210ENST00000479440 IL1RL1Q01638 556 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 CCDC153Q494R4 210 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 PRR31Q5SQ13 230 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 SPATA21Q7Z572 469 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 PEG10Q86TG7 708 aaKnown RBP13.95□□□□□ -0.18
DDX56-210ENST00000479440 DDIASQ8IXT1 998 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 SVOPLQ8N434 492 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 ARFGAP2Q8N6H7 521 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 CCDC63Q8NA47 563 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 IFT81Q8WYA0 676 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 PMM1Q92871 262 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 TMEM186Q96B77 213 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 SLC35G5Q96KT7 338 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 EXOSC3Q9NQT5 275 aaKnown RBP13.95□□□□□ -0.18
DDX56-210ENST00000479440 HIF1ANQ9NWT6 349 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 PSMC3IPQ9P2W1 217 aaPredicted RBP13.95□□□□□ -0.18
DDX56-210ENST00000479440 USP22Q9UPT9 525 aa13.95□□□□□ -0.18
DDX56-210ENST00000479440 ZNF208O43345 1280 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 FCMRO60667 390 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 LYPLA1O75608 230 aaPredicted RBP13.94□□□□□ -0.18
DDX56-210ENST00000479440 RGS9O75916 674 aaPredicted RBP13.94□□□□□ -0.18
DDX56-210ENST00000479440 TFP02787 698 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 PROCP04070 461 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 CALCRP30988 508 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 POLR2HP52434 150 aaKnown RBP13.94□□□□□ -0.18
DDX56-210ENST00000479440 ADRM1Q16186 407 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 PDLIM3Q53GG5 364 aaPredicted RBP13.94□□□□□ -0.18
DDX56-210ENST00000479440 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
DDX56-210ENST00000479440 KANK2Q63ZY3 851 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 ADGRG3Q86Y34 549 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 OR9K2Q8NGE7 335 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 PPP3R2Q96LZ3 170 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 SF3B5Q9BWJ5 86 aaKnown RBP13.94□□□□□ -0.18
DDX56-210ENST00000479440 TUBB1Q9H4B7 451 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 PIF1Q9H611 641 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 POLE3Q9NRF9 147 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 PYCARDQ9ULZ3 195 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 WDR45Q9Y484 360 aa13.94□□□□□ -0.18
DDX56-210ENST00000479440 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 RNF103-CHMP3A0A140T963 221 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 OR6C65A6NJZ3 312 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 LGI1O95970 557 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 AGR2O95994 175 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 IGLV1-44P01699 117 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 MSMBP08118 114 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 IMPDH2P12268 514 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 THBS4P35443 961 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 MAP2K6P52564 334 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 POU3F1Q03052 451 aaPredicted RBP13.93□□□□□ -0.18
DDX56-210ENST00000479440 ATAD3BQ5T9A4 648 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 ANKRD16Q6P6B7 361 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 FAM169BQ8N8A8 192 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 OR51F2Q8NH61 342 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 MAGEE2Q8TD90 523 aaPredicted RBP13.93□□□□□ -0.18
DDX56-210ENST00000479440 TWIST2Q8WVJ9 160 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 CKAP2Q8WWK9 683 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 AURKBQ96GD4 344 aaPredicted RBP13.93□□□□□ -0.18
DDX56-210ENST00000479440 ALKBH3Q96Q83 286 aaPredicted RBP13.93□□□□□ -0.18
DDX56-210ENST00000479440 DOK1Q99704 481 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 SERHL2Q9H4I8 314 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 OXSMQ9NWU1 459 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 DNAJC15Q9Y5T4 150 aa13.93□□□□□ -0.18
DDX56-210ENST00000479440 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 SKAP2O75563 359 aaPredicted RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 IGKV3-15P01624 115 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 GUSBP08236 651 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 SAGP10523 405 aaPredicted RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 HOXB1P14653 301 aaPredicted RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 EPHA1P21709 976 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 ECHS1P30084 290 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 GPR6P46095 362 aaPredicted RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 IDH2P48735 452 aaKnown RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 ARFIP2P53365 341 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 SH3BGRP55822 239 aaPredicted RBP13.92□□□□□ -0.18
DDX56-210ENST00000479440 HBA1P69905 142 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 HPCAP84074 193 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 PTGR1Q14914 329 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 MAPK14Q16539 360 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 AWAT1Q58HT5 328 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 THSD4Q6ZMP0 1018 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 OLIG3Q7RTU3 272 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 GPAT4Q86UL3 456 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 CDK20Q8IZL9 346 aa13.92□□□□□ -0.18
DDX56-210ENST00000479440 ZCCHC24Q8N2G6 241 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms