RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GBAP04062 536 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 CPT2P23786 658 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 CASRP41180 1078 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 PPP2CBP62714 309 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 PPP2CAP67775 309 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 INPP5JQ15735 1006 aaPredicted RBP12.77□□□□□ -0.37
HDAC1-206ENST00000476391 RPE65Q16518 533 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 UPP1Q16831 310 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 NDUFAF7Q7L592 441 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 ANGPTL5Q86XS5 388 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 RASGEF1AQ8N9B8 481 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 CCDC107Q8WV48 283 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 HAVCR1Q96D42 359 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 RHOVQ96L33 236 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 TMEM231Q9H6L2 316 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 MIEF1Q9NQG6 463 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 P2RX2Q9UBL9 471 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
HDAC1-206ENST00000476391 A0A1W2PPK0 400 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 FAM183AA6NL82 134 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 IFITM5A6NNB3 132 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 J3QLW9 94 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 TBX18O95935 607 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 RHOP08100 348 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF19P17023 458 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 XPAP23025 273 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-206ENST00000476391 AVPR2P30518 371 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 GLP1RP43220 463 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ST8SIA6P61647 398 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 NKPD1Q17RQ9 610 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 DNLZQ5SXM8 178 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 OR10K2Q6IF99 312 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 MED27Q6P2C8 311 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 PLBD1Q6P4A8 553 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ENPP7Q6UWV6 458 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 FCRLAQ7L513 359 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 OR4C16Q8NGL9 310 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 OR5M8Q8NGP6 311 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 XAGE5Q8WWM1 108 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 OR5P2Q8WZ92 322 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 PHYHIPQ92561 330 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-206ENST00000476391 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 SUV39H2Q9H5I1 410 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ZDHHC3Q9NYG2 299 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 TAAR2Q9P1P5 351 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 A0A1B0GTI1 187 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 CASTOR2A6NHX0 329 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 FOXE1O00358 373 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-206ENST00000476391 KIAA0355O15063 1070 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 RBBP9O75884 186 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 CD74P04233 296 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 SLC2A1P11166 492 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 TPT1P13693 172 aaKnown RBP12.76□□□□□ -0.37
HDAC1-206ENST00000476391 HIST1H1BP16401 226 aaKnown RBP12.76□□□□□ -0.37
HDAC1-206ENST00000476391 GABRR2P28476 465 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 TAS2R41P59536 307 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 NAAAQ02083 359 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 HGFACQ04756 655 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 DRAM2Q6UX65 266 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 NUDT13Q86X67 352 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 GLB1L2Q8IW92 636 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 CBARPQ8N350 705 aaPredicted RBP12.76□□□□□ -0.37
HDAC1-206ENST00000476391 SLC30A7Q8NEW0 376 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ING5Q8WYH8 240 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 LRIG1Q96JA1 1093 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 HSPA12BQ96MM6 686 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 NEUROD4Q9HD90 331 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 MRPS30Q9NP92 439 aaKnown RBP12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF337Q9Y3M9 751 aa12.76□□□□□ -0.37
HDAC1-206ENST00000476391 KIF26AQ9ULI4 1882 aaPredicted RBP12.75□□□□□ -0.37
HDAC1-206ENST00000476391 TMEM72A0PK05 275 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 F8VVB4 439 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 F8VWA3 439 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 H7C417 338 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 ZNF197O14709 1029 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 MELTFP08582 738 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 CSF1P09603 554 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 NDUFV2P19404 249 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 RAB5AP20339 215 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 PPP2R1BP30154 601 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 ANXA11P50995 505 aaKnown RBP12.75□□□□□ -0.37
HDAC1-206ENST00000476391 PCGF3Q3KNV8 242 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 PLEKHS1Q5SXH7 462 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 RPTNQ6XPR3 784 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 SSX6Q7RTT6 188 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 VRK3Q8IV63 474 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 KLHDC8AQ8IYD2 350 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 KDF1Q8NAX2 398 aaPredicted RBP12.75□□□□□ -0.37
HDAC1-206ENST00000476391 OR5AP2Q8NGF4 316 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 SYNPRQ8TBG9 265 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 DUSP19Q8WTR2 217 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 SMPDL3BQ92485 455 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 PAAF1Q9BRP4 392 aa12.75□□□□□ -0.37
HDAC1-206ENST00000476391 LAT2Q9GZY6 243 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms