RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 B4DSR2 109 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 hCG_2039718K7EN88 272 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC28A1O00337 649 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ANKRD28O15084 1053 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 LSM1O15116 133 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 FCMRO60667 390 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 STX11O75558 287 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 UGT2B17O75795 530 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 RGS9O75916 674 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 C6orf47O95873 294 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CSTAP01040 98 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 IGLV1-44P01699 117 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CRYAAP02489 173 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 GSTA1P08263 222 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CECR9P0C854 216 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 MYL2P10916 166 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 LAMP1P11279 417 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 BCKDHAP12694 445 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 IFNGR1P15260 489 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CDH2P19022 906 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ECHS1P30084 290 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CALCRP30988 508 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 PGM1P36871 562 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 HPCAL1P37235 193 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 APOBEC1P41238 236 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC1A3P43003 542 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 GATA4P43694 442 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CCT3P49368 545 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CLK1P49759 484 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 KHKP50053 298 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ARFIP2P53365 341 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 OR2B6P58173 313 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 HILS1P60008 231 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 NAA20P61599 178 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 RPS26P62854 115 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 NAAAQ02083 359 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 PLAURQ03405 335 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC17A1Q14916 467 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 GPR68Q15743 365 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 MAPK14Q16539 360 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 C3orf36Q3SXR2 165 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 TBRG1Q3YBR2 411 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SPDYE7PQ495Y7 208 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 AWAT1Q58HT5 328 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 LIPMQ5VYY2 423 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 C8orf74Q6P047 294 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 EMBQ6PCB8 327 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 VHLLQ6RSH7 139 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 PAQR6Q6TCH4 344 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ZYG11AQ6WRX3 759 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 RNF165Q6ZSG1 346 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 EIF3MQ7L2H7 374 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 OLIG3Q7RTU3 272 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 GRINAQ7Z429 371 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 R3HCC1LQ7Z5L2 792 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 PEG10Q86TG7 708 aaKnown RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 MYPOPQ86VE0 399 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 GLCCI1Q86VQ1 547 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ADGRG3Q86Y34 549 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF786Q8N393 782 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SVOPLQ8N434 492 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 TEX29Q8N6K0 151 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ZIC4Q8N9L1 334 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 NUP37Q8NFH4 326 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 OR7A2PQ8NGA2 310 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 OR4F15Q8NGB8 312 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 OR5AK3PQ8NH89 298 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ACMSDQ8TDX5 336 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF418Q8TF45 676 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 NEU4Q8WWR8 484 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 OR5P2Q8WZ92 322 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM45BQ96B21 275 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CCDC126Q96EE4 140 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 FMO2Q99518 471 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 DOK1Q99704 481 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 KCNS3Q9BQ31 491 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF350Q9GZX5 532 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 TUBB1Q9H4B7 451 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SERHL2Q9H4I8 314 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF442Q9H7R0 627 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SEC61A2Q9H9S3 476 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 OBP2BQ9NPH6 170 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 PARPBPQ9NWS1 579 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 HIF1ANQ9NWT6 349 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM181Q9P2C4 612 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 CRNNQ9UBG3 495 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 FBXO9Q9UK97 447 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 MKLN1Q9UL63 735 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF232Q9UNY5 417 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 TRAPPC4Q9Y296 219 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 TMED5Q9Y3A6 229 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 SPEF1Q9Y4P9 236 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 PCDHB14Q9Y5E9 798 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 RYR3Q15413 4870 aa4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 NUP214P35658 2090 aaPredicted RBP4.44□□□□□ -1.7
SNRNP40-204ENST00000474025 ARPC4-TTLL3A0A0A6YYG9 625 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM129A0AVI4 362 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ZC3H12DA2A288 527 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 LYNX1G3V0Z9 82 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 AZIN1O14977 448 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms