RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SLC19A3Q9BZV2 496 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 OR11A1Q9GZK7 315 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 TAS2R5Q9NYW4 299 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 USE1Q9NZ43 259 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 TMCC3Q9ULS5 477 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 BOKQ9UMX3 212 aaPredicted RBP5.36□□□□□ -1.55
USP39-213ENST00000467885 MGAT4BQ9UQ53 548 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 TRAPPC4Q9Y296 219 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 RPH3AQ9Y2J0 694 aaPredicted RBP5.36□□□□□ -1.55
USP39-213ENST00000467885 SLC6A5Q9Y345 797 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 MED31Q9Y3C7 131 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 LRRC42Q9Y546 428 aa5.36□□□□□ -1.55
USP39-213ENST00000467885 PCNX3Q9H6A9 2034 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ARRDC5A6NEK1 342 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ELOA3DA6NLF2 546 aaPredicted RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 FAM166BA8MTA8 275 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 H0YC42 278 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 MS4A18H0YCH9 400 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 LINC01387J3KSC0 135 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 SUSD5O60279 629 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 PIP5K1CO60331 668 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 OR10H3O60404 316 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 E2F6O75461 281 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 CH25HO95992 272 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 BGLAPP02818 100 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ASAH2BP0C7U1 165 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 IFI30P13284 250 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 UQCRBP14927 111 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ZNF23P17027 643 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 GDF1P27539 372 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 PEX2P28328 305 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 GIPRP48546 466 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ZNF41P51814 821 aaPredicted RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 AGFG1P52594 562 aaKnown RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 TPD52P55327 224 aaPredicted RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 CLDN20P56880 219 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 FXYD6P3P58550 94 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 H3F3AP84243 136 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 CDK5Q00535 292 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 PMP22Q01453 160 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 PLGLB1Q02325 96 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 C19orf57Q0VDD7 668 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 FOXF1Q12946 379 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 TSPAN31Q12999 210 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 DAG1Q14118 895 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 TOMM20Q15388 145 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 TRIP10Q15642 601 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ZNF74Q16587 644 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 CTU2Q2VPK5 515 aaKnown RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 MS4A18Q3C1V0 323 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ELOA3BQ3SY89 546 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 FGD3Q5JSP0 725 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 C1orf140Q5VVS0 124 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 POMZP3Q6PJE2 187 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 KLHL17Q6TDP4 642 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 TMPPEQ6ZT21 453 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 TRILQ7L0X0 811 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 RRM2BQ7LG56 351 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 SLC46A3Q7Z3Q1 461 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 KIF18BQ86Y91 864 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 FAM109AQ8N4B1 249 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 CISD2Q8N5K1 135 aaKnown RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 PACRGLQ8N7B6 248 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 LRRC75AQ8NAA5 344 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 AQP11Q8NBQ7 271 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ATP6V1C2Q8NEY4 427 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ELOA3Q8NG57 546 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 OR10G2Q8NGC3 310 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 OR9Q2Q8NGE9 314 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 OR14L1PQ8NHC6 308 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 PFN4Q8NHR9 129 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 MFSD8Q8NHS3 518 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 C9orf43Q8TAL5 461 aaPredicted RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 NEIL3Q8TAT5 605 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 MAGEE2Q8TD90 523 aaPredicted RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 OSTF1Q92882 214 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 UBE2FQ969M7 185 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 RELTQ969Z4 430 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 PNPLA2Q96AD5 504 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 EME1Q96AY2 570 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 WDYHV1Q96HA8 205 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ADGRG7Q96K78 797 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 MOGAT1Q96PD6 335 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 PIGQQ9BRB3 760 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 C9orf16Q9BUW7 83 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 UCK2Q9BZX2 261 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 KLHL4Q9C0H6 718 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 GABARAPL1Q9H0R8 117 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 SLC25A18Q9H1K4 315 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 ZNF703Q9H7S9 590 aaPredicted RBP5.35□□□□□ -1.55
USP39-213ENST00000467885 SERINC1Q9NRX5 453 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 FAM118AQ9NWS6 357 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 IL20Q9NYY1 176 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 CHRNA9Q9UGM1 479 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 AP4B1Q9Y6B7 739 aa5.35□□□□□ -1.55
USP39-213ENST00000467885 DSPP15924 2871 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 ACACAQ13085 2346 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 TRAV36DV7A0A075B6V5 113 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 TRGV5A0A0B4J1U4 118 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 LOC102725191A0A1B0GVB3 256 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms