RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TPMTP51580 245 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 GLO1Q04760 184 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 CLLU1OSQ5K130 101 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 TIGD3Q6B0B8 471 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 PGBD5Q8N414 524 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 CDRT4Q8N9R6 151 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 TPSD1Q9BZJ3 242 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 NIPAL2Q9H841 368 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 ZNF337Q9Y3M9 751 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 WASH4PA8MWX3 477 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 ZNF593O00488 134 aaPredicted RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 GP2P55259 537 aaKnown RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 CLINT1Q14677 625 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 ESPNLQ6ZVH7 1005 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 OR10R2Q8NGX6 335 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 PIGCQ92535 297 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 TM9SF4Q92544 642 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 MED30Q96HR3 178 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 TNFRSF13CQ96RJ3 184 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 CXCL16Q9H2A7 254 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 NPC1O15118 1278 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 BET1O15155 118 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 DPM1O60762 260 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 KCNK5O95279 499 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 RPA2P15927 270 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 AOAHP28039 575 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 DAP3P51398 398 aaKnown RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 DUSP7Q16829 419 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 FJX1Q86VR8 437 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 SLC35F3Q8IY50 421 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
UBR4-205ENST00000417040 LUZP4Q9P127 313 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 MYO10Q9HD67 2058 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 SLC22A23A1A5C7 686 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 MEGF11A6BM72 1044 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 AKR7A2O43488 359 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 DNAJB6O75190 326 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 MAT1AQ00266 395 aaKnown RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 ZNF33BQ06732 778 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 PLGLAQ15195 96 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 CPEB2Q7Z5Q1 589 aaKnown RBP11.23□□□□□ -0.61
UBR4-205ENST00000417040 OR6F1Q8NGZ6 308 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 MZB1Q8WU39 189 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 ZNF480Q8WV37 535 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.615e-7■■■□□ 15
UBR4-205ENST00000417040 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 SEMA4GQ9NTN9 838 aa11.23□□□□□ -0.61
UBR4-205ENST00000417040 C1SP09871 688 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 ELAVL3Q14576 367 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 NLRC3Q7RTR2 1065 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 BATF2Q8N1L9 274 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 ADOQ96SZ5 270 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 CDCP1Q9H5V8 836 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 SDHAF2Q9NX18 166 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 PLEK2Q9NYT0 353 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 TMPRSS11EQ9UL52 423 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 EFCAB7A8K855 629 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 AIPO00170 330 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 RAB27BO00194 218 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 PSMB1P20618 241 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 MAKP20794 623 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 SERPINF1P36955 418 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 DDOSTP39656 456 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 GIPRP48546 466 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 STK11Q15831 433 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 RPE65Q16518 533 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 BPHLQ86WA6 291 aaPredicted RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 SAT2Q96F10 170 aaPredicted RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 C14orf79Q96F83 325 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 TXNDC15Q96J42 360 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 SLC41A2Q96JW4 573 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 NENFQ9UMX5 172 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 A0A0A6YYJ9 748 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 ZIC2O95409 532 aaPredicted RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 B3GALT4O96024 378 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 MSR1P21757 451 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 MLF1P58340 268 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 DUSP6Q16828 381 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 HACD4Q5VWC8 232 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 ZBTB44Q8NCP5 570 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 ZIC5Q96T25 663 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 MCOLN1Q9GZU1 580 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 PATZ1Q9HBE1 687 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 C4AP0C0L4 1744 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 C4BP0C0L5 1744 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 OR6C76A6NM76 312 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 DUX1O43812 170 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 SELENOFO60613 162 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 NSA2O95478 260 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 HBMQ6B0K9 141 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 MRPL21Q7Z2W9 205 aaKnown RBP11.22□□□□□ -0.61
UBR4-205ENST00000417040 PELI3Q8N2H9 469 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 LRIG1Q96JA1 1093 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 NMNAT3Q96T66 252 aa11.22□□□□□ -0.61
UBR4-205ENST00000417040 NRIP3Q9NQ35 241 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms