RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 RPS11P62280 158 aaKnown RBP eCLIP18.26■□□□□ 0.51
CRLF3-201ENST00000324238 ERV3-1Q14264 604 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 ZNF776Q68DI1 518 aaPredicted RBP18.26■□□□□ 0.51
CRLF3-201ENST00000324238 GPALPP1Q8IXQ4 340 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 PBX4Q9BYU1 374 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 DLL4Q9NR61 685 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 C19orf53Q9UNZ5 99 aaPredicted RBP18.26■□□□□ 0.51
CRLF3-201ENST00000324238 PRR32B1ATL7 298 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 SLC25A25Q6KCM7 469 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 FTMTQ8N4E7 242 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 OR8K3Q8NH51 312 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 RPLP0P6Q8NHW5 317 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 C2orf42Q9NWW7 574 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 MPDZO75970 2070 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 CNTRLQ7Z7A1 2325 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 H0YGG7 62 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 K7EQS6 105 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 PIN1P1O15428 100 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 RGS11O94810 467 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 UBL3O95164 117 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 TYRP1P17643 537 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 ARF3P61204 181 aaPredicted RBP18.25■□□□□ 0.51
CRLF3-201ENST00000324238 SIRPAP78324 504 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 KCNAB1Q14722 419 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 TMPRSS11FQ6ZWK6 438 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 OR52R1Q8NGF1 315 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 FAM3CQ92520 227 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 KCTD12Q96CX2 325 aaKnown RBP18.25■□□□□ 0.51
CRLF3-201ENST00000324238 OR2M4Q96R27 311 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 RANBP3Q9H6Z4 567 aaPredicted RBP18.25■□□□□ 0.51
CRLF3-201ENST00000324238 B3GNT2Q9NY97 397 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 ZNF224Q9NZL3 707 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 SPATA2Q9UM82 520 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 DTX4Q9Y2E6 619 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 COLEC10Q9Y6Z7 277 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 IGKV1D-16P01601 117 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 PDGFAP04085 211 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 GAAP10253 952 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 ERVK-25P63136 954 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 FHL1Q13642 323 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 FCRL6Q6DN72 434 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 FIGLAQ6QHK4 219 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 TPRA1Q86W33 373 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 ZNF511Q8NB15 262 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 LRRC20Q8TCA0 184 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 GFI1Q99684 422 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 JAM3Q9BX67 310 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 C20orf85Q9H1P6 137 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 EMC7Q9NPA0 242 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 SLC22A7Q9Y694 548 aa18.25■□□□□ 0.51
CRLF3-201ENST00000324238 ARPC1BO15143 372 aaKnown RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 UGT2B7P16662 529 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 RAD52P43351 418 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 RPS15AP62244 130 aaKnown RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 PLA2G7Q13093 441 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 SNTA1Q13424 505 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 FHL5Q5TD97 284 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 NLRC3Q7RTR2 1065 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 COMMD7Q86VX2 200 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 UXS1Q8NBZ7 420 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 POM121CA8CG34 1229 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 ADH1BP00325 375 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 TPOP07202 933 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 POU6F2P78424 691 aaPredicted RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 CDK5R1Q15078 307 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 PXDC1Q5TGL8 231 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 HSPA12BQ96MM6 686 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 TCEAL2Q9H3H9 227 aaPredicted RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 ANKRD10Q9NXR5 420 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 KLF8O95600 359 aaPredicted RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 THBS1P07996 1170 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 TMIGD3P0DMS9 266 aaPredicted RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 HOXB2P14652 356 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 ANXA7P20073 488 aaKnown RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 NANOS3P60323 173 aaKnown RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 UBE2MP61081 183 aaKnown RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 KLF9Q13886 244 aaPredicted RBP18.24■□□□□ 0.51
CRLF3-201ENST00000324238 HSD17B12Q53GQ0 312 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 CD276Q5ZPR3 534 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 KIRREL2Q6UWL6 708 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 APOOLQ6UXV4 268 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 RTL4Q6ZR62 310 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 USP53Q70EK8 1073 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 OR11G2Q8NGC1 345 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 ADAMTS14Q8WXS8 1223 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 OR2M2Q96R28 347 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 PHF11Q9UIL8 331 aa18.24■□□□□ 0.51
CRLF3-201ENST00000324238 C1orf61Q13536 156 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 SLC35F2Q8IXU6 374 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 RBP7Q96R05 134 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 SERINC2Q96SA4 455 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 CA10Q9NS85 328 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 C2orf16Q68DN1 1984 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 LOC105371267A0A1B0GV96 52 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 OR6C68A6NDL8 312 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 H7C1C5 153 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 RDH16O75452 317 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 ALDOBP05062 364 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 GALP22466 123 aa18.23■□□□□ 0.51
CRLF3-201ENST00000324238 MMP15P51511 669 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms