RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 RELTQ969Z4 430 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 KTI12Q96EK9 354 aaPredicted RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 OR5B2Q96R09 309 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 KLHL4Q9C0H6 718 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 MEPEQ9NQ76 525 aaPredicted RBP12.65□□□□□ -0.38
VPS25-201ENST00000253794 TIGARQ9NQ88 270 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 RHCGQ9UBD6 479 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 AP4S1Q9Y587 144 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 FAM215AQ9Y5M1 114 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 LYVE1Q9Y5Y7 322 aa12.65□□□□□ -0.38
VPS25-201ENST00000253794 A0A087WUU8 490 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 TRBV4-1A0A0J9YWV2 114 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 A0A1W2PNR3 127 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
VPS25-201ENST00000253794 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
VPS25-201ENST00000253794 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
VPS25-201ENST00000253794 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 E9PLN8 166 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 SULT2B1O00204 365 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 HNRNPRO43390 633 aaKnown RBP12.64□□□□□ -0.39
VPS25-201ENST00000253794 CXCL13O43927 109 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 EIF1BO60739 113 aaKnown RBP12.64□□□□□ -0.39
VPS25-201ENST00000253794 GADD45GO95257 159 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 MT-ATP6P00846 226 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 MT-ND1P03886 318 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 TFPIP10646 304 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 CCNA2P20248 432 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 RRM2P31350 389 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 SLC35A1P78382 337 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 SPIBQ01892 262 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 SRYQ05066 204 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 MFSD13AQ14CX5 517 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 IGFBP7Q16270 282 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 C1orf185Q5T7R7 199 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 C1QL3Q5VWW1 255 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 MBOAT2Q6ZWT7 520 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 ADPRHL1Q8NDY3 354 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 ATP6V1C2Q8NEY4 427 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
VPS25-201ENST00000253794 OSTF1Q92882 214 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 WNT2BQ93097 391 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 DMRTA2Q96SC8 542 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 VKORC1Q9BQB6 163 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 SRXN1Q9BYN0 137 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 ALKBH4Q9NXW9 302 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 DNAJB9Q9UBS3 223 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 MED31Q9Y3C7 131 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 TESMINQ9Y4I5 508 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 RELNP78509 3460 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 GTF3C1Q12789 2109 aa12.64□□□□□ -0.39
VPS25-201ENST00000253794 SH3PXD2BA1X283 911 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 H3BNX3 289 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 CST1P01037 141 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 BGLAPP02818 100 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 OPN1LWP04000 364 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 FCGR1AP12314 374 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 FCGR2AP12318 317 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 EIF1AXP47813 144 aaKnown RBP12.63□□□□□ -0.39
VPS25-201ENST00000253794 ERFP50548 548 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 CASP6P55212 293 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 PRKCDQ05655 676 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 ATP6AP1Q15904 470 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 ZNF74Q16587 644 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 ZNF585AQ6P3V2 769 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 PODNL1Q6PEZ8 512 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 PAQR6Q6TCH4 344 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 B3GNT6Q6ZMB0 384 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 SLC46A3Q7Z3Q1 461 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 ZGRF1Q86YA3 2104 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 LINC00471Q8N535 108 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 SCAIQ8N9R8 606 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 RNF128Q8TEB7 428 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 ZNF845Q96IR2 970 aaPredicted RBP12.63□□□□□ -0.39
VPS25-201ENST00000253794 PSD2Q9BQI7 771 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 FKRPQ9H9S5 495 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 GP6Q9HCN6 339 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 VNN3Q9NY84 501 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 TINAGQ9UJW2 476 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 MCTS1Q9ULC4 181 aaKnown RBP12.63□□□□□ -0.39
VPS25-201ENST00000253794 OSGIN2Q9Y236 505 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 CORINQ9Y5Q5 1042 aa12.63□□□□□ -0.39
VPS25-201ENST00000253794 ARRDC5A6NEK1 342 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 ANKRD65E5RJM6 399 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 SMAD9O15198 467 aaKnown RBP12.62□□□□□ -0.39
VPS25-201ENST00000253794 CLOCKO15516 846 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 ENTPD5O75356 428 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 DEAF1O75398 565 aaPredicted RBP12.62□□□□□ -0.39
VPS25-201ENST00000253794 TSPAN19P0C672 248 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 GNLYP22749 145 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 TIMP3P35625 211 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 RPS5P46782 204 aaKnown RBP12.62□□□□□ -0.39
VPS25-201ENST00000253794 P2RY4P51582 365 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 LTBQ06643 244 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 PDK3Q15120 406 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 PON3Q15166 354 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 SEC23BQ15437 767 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 FGD3Q5JSP0 725 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 ABLIM2Q6H8Q1 611 aa12.62□□□□□ -0.39
VPS25-201ENST00000253794 ZNF730Q6ZMV8 503 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms