RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 NPIPA7E9PJI5 369 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 MED6O75586 246 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 UFL1O94874 794 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 MBD3O95983 291 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 NPIPA8P0DM63 369 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 CYP2F1P24903 491 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 ANXA13P27216 316 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 MAPK3P27361 379 aaPredicted RBP2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 HPCAL1P37235 193 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 PTGDSP41222 190 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 DAP3P51398 398 aaKnown RBP2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 PLA2G16P53816 162 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 HSPA2P54652 639 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 TGFBR3Q03167 851 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 SCGB2A2Q13296 93 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 MADCAM1Q13477 382 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 C6orf120Q7Z4R8 191 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 RDH10Q8IZV5 341 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 C6orf223Q8N319 242 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 NPBQ8NG41 125 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 OR6C4Q8NGE1 309 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 CTRCQ99895 268 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 ZNF670Q9BS34 389 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 NXF5Q9H1B4 397 aaKnown RBP2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 C20orf85Q9H1P6 137 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 STOX2Q9P2F5 926 aaPredicted RBP2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 GNG12Q9UBI6 72 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 NPIPA1Q9UND3 350 aa2.86□□□□□ -1.95
SCAMP1-205ENST00000614488 A0A087WZY1 265 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 A6NIZ1 184 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 RS1O15537 224 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 LGALS2P05162 132 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 PLEKP08567 350 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 GIPP09681 153 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 PNMA6AP0CW24 399 aaPredicted RBP2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 ATP6V1B2P21281 511 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 NT5EP21589 574 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 PMELP40967 661 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 DLX1P56177 255 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 RAP1BP61224 184 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 TRIM16LQ309B1 348 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 GPRC6AQ5T6X5 926 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 CTRB2Q6GPI1 263 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 CNSTQ6PJW8 725 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 TMIGD1Q6UXZ0 262 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 KIAA1328Q86T90 577 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 FTMTQ8N4E7 242 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 TMEM158Q8WZ71 300 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 P2RY13Q9BPV8 354 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 VCPKMTQ9H867 229 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 FOLH1BQ9HBA9 442 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 PLEKHH1Q9ULM0 1364 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 PTCH1Q13635 1447 aa2.85□□□□□ -1.95
SCAMP1-205ENST00000614488 LRP4O75096 1905 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 IGKV1D-8A0A087WSZ0 117 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 TRDCB7Z8K6 153 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 LAD1O00515 517 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 CLDN3O15551 220 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 CXCL13O43927 109 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 TPST2O60704 377 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 CALCBP10092 127 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 POU2F1P14859 743 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 ZNF823P16415 610 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 SHMT2P34897 504 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 RFC4P35249 363 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 INAQ16352 499 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 PIGGQ5H8A4 983 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 TMEM255AQ5JRV8 349 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 CENPLQ8N0S6 344 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 HTR3CQ8WXA8 447 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 NDRG1Q92597 394 aaKnown RBP2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 NIPSNAP3BQ9BS92 247 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 RTBDNQ9BSG5 229 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 GPR61Q9BZJ8 451 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 ROGDIQ9GZN7 287 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 SUDS3Q9H7L9 328 aaPredicted RBP2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 AATFQ9NY61 560 aaKnown RBP eCLIP2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 SIGLEC8Q9NYZ4 499 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 MFHAS1Q9Y4C4 1052 aa2.84□□□□□ -1.95
SCAMP1-205ENST00000614488 MAP3K15Q6ZN16 1313 aa2.84□□□□□ -1.96
SCAMP1-205ENST00000614488 PHF3Q92576 2039 aaKnown RBP2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 A0A0G2JN53 185 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 DCTN6O00399 190 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 ZSCAN12O43309 604 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 FOXH1O75593 365 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 TNFSF13O75888 250 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 TRIM16O95361 564 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 HOXA9P31269 272 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 MXD4Q14582 209 aaPredicted RBP2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 PSG5Q15238 335 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 BOLA3Q53S33 107 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 FAM71E1Q6IPT2 247 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 ISLR2Q6UXK2 745 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 GET4Q7L5D6 327 aaPredicted RBP2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 ACOT1Q86TX2 421 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 MFSD6LQ8IWD5 586 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 ARL10Q8N8L6 244 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 ATP6V0D2Q8N8Y2 350 aa2.83□□□□□ -1.96
SCAMP1-205ENST00000614488 OR4D9Q8NGE8 314 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms