RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 KLHL15Q96M94 604 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 BTBD10Q9BSF8 475 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 PRRG4Q9BZD6 226 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 OR10A4Q9H209 315 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 PIF1Q9H611 641 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 GMPR2Q9P2T1 348 aaKnown RBP11.92□□□□□ -0.5
CTSA-213ENST00000606782 USP22Q9UPT9 525 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 DTNAQ9Y4J8 743 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 GPC6Q9Y625 555 aaPredicted RBP11.92□□□□□ -0.5
CTSA-213ENST00000606782 HEATR5AQ86XA9 2040 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 ELOVL7A1L3X0 281 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 PRORSD1PA6NEY8 169 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 AGAP5A6NIR3 686 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 C5orf58C9J3I9 102 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 H3BNH8 94 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 TNFSF11O14788 317 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 OIP5O43482 229 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 EIF4E2O60573 245 aaKnown RBP11.91□□□□□ -0.5
CTSA-213ENST00000606782 SYNGR4O95473 234 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 PABPC4LP0CB38 370 aaKnown RBP11.91□□□□□ -0.5
CTSA-213ENST00000606782 RPS4Y1P22090 263 aaKnown RBP11.91□□□□□ -0.5
CTSA-213ENST00000606782 PCGF2P35227 344 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 GSK3BP49841 420 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 CTBP2P56545 445 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 PCBP3P57721 371 aaKnown RBP11.91□□□□□ -0.5
CTSA-213ENST00000606782 CARD18P57730 90 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 SAMD4BQ5PRF9 694 aaKnown RBP11.91□□□□□ -0.5
CTSA-213ENST00000606782 SHEQ5VZ18 495 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 STAC2Q6ZMT1 411 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 MICU2Q8IYU8 434 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 LRRC75A-AS1Q8N1F1 130 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 WFDC11Q8NEX6 87 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 TOR1AIP2Q8NFQ8 470 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 OR2T12Q8NG77 320 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 BBS10Q8TAM1 723 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 PHOSPHO1Q8TCT1 267 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 RSPO3Q9BXY4 272 aaPredicted RBP11.91□□□□□ -0.5
CTSA-213ENST00000606782 ALG2Q9H553 416 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 GP6Q9HCN6 339 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 ADA2Q9NZK5 511 aa11.91□□□□□ -0.5
CTSA-213ENST00000606782 C6orf203Q9P0P8 240 aaPredicted RBP11.91□□□□□ -0.5
CTSA-213ENST00000606782 NSD1Q96L73 2696 aaPredicted RBP11.9□□□□□ -0.5
CTSA-213ENST00000606782 NPIPA5A0A0B4J1W7 369 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 GJE1A6NN92 205 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 NPIPA7E9PJI5 369 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 M0QX08 132 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 GSC2O15499 205 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 KLF4O43474 513 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 PLGP00747 810 aaPredicted RBP11.9□□□□□ -0.5
CTSA-213ENST00000606782 OPN1LWP04000 364 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 DBIP07108 87 aaKnown RBP11.9□□□□□ -0.5
CTSA-213ENST00000606782 THBDP07204 575 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 NPIPA8P0DM63 369 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 HSD17B1P14061 328 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 PRKCAP17252 672 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 SHC1P29353 583 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 KCNJ5P48544 419 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 RASSF2P50749 326 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 HPCAP84074 193 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 FOXF1Q12946 379 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 CEACAM7Q14002 265 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 FXNQ16595 210 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 ZNF239Q16600 458 aaKnown RBP11.9□□□□□ -0.5
CTSA-213ENST00000606782 FREM1Q5H8C1 2179 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 RPS26P11Q5JNZ5 115 aaPredicted RBP11.9□□□□□ -0.5
CTSA-213ENST00000606782 PDZK1Q5T2W1 519 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 BEND4Q6ZU67 534 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 ZNF550Q7Z398 422 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 RNF128Q8TEB7 428 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 PIGTQ969N2 578 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 ZNF524Q96C55 264 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 MRGPRX4Q96LA9 322 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 TMEM185BQ9H7F4 350 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 FANCFQ9NPI8 374 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 TIGARQ9NQ88 270 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
CTSA-213ENST00000606782 ZNF232Q9UNY5 417 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 CARD8Q9Y2G2 431 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 GPR52Q9Y2T5 361 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 IFT52Q9Y366 437 aa11.9□□□□□ -0.5
CTSA-213ENST00000606782 RAI1Q7Z5J4 1906 aaPredicted RBP11.9□□□□□ -0.51
CTSA-213ENST00000606782 DSCAMO60469 2012 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 VPS13CQ709C8 3753 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 CENPVL1A0A0U1RR11 272 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 SERINC4A6NH21 518 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 GYG2O15488 501 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 ZNF264O43296 627 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 MFN2O95140 757 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 PSMB1P20618 241 aaKnown RBP11.89□□□□□ -0.51
CTSA-213ENST00000606782 FPR1P21462 350 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 AGTR1P30556 359 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 KDELR2P33947 212 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 NKX6-1P78426 367 aaPredicted RBP11.89□□□□□ -0.51
CTSA-213ENST00000606782 KCNJ10P78508 379 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 RNPS1Q15287 305 aaKnown RBP11.89□□□□□ -0.51
CTSA-213ENST00000606782 TOMM34Q15785 309 aaPredicted RBP11.89□□□□□ -0.51
CTSA-213ENST00000606782 ACKR1Q16570 336 aa11.89□□□□□ -0.51
CTSA-213ENST00000606782 DNAL1Q4LDG9 190 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms