RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 UQCRFS1P47985 274 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 RPS3AP61247 264 aaKnown RBP13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 MYBPHQ13203 477 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 TRAM2Q15035 370 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 SGCBQ16585 318 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 C1orf140Q5VVS0 124 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 TTC33Q6PID6 262 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 LINC00114Q6XXX2 140 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 CHMP1BQ7LBR1 199 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 PIWIL3Q7Z3Z3 882 aaKnown RBP13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 DOLPP1Q86YN1 238 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 P3H2Q8IVL5 708 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 NKAIN4Q8IVV8 208 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 OR10D3Q8NH80 312 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 ZPLD1Q8TCW7 415 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 ZNF347Q96SE7 839 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 PRSS27Q9BQR3 290 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 CHID1Q9BWS9 393 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 TP63Q9H3D4 680 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 COQ10BQ9H8M1 238 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 NMNAT1Q9HAN9 279 aaPredicted RBP13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 TINAGQ9UJW2 476 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 HDGFL3Q9Y3E1 203 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 TESMINQ9Y4I5 508 aa13.9□□□□□ -0.18
RPRD1A-208ENST00000589050 IGKV1D-42A0A075B6H8 117 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 TRGV8A0A0C4DH27 118 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 SULT2B1O00204 365 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 CXCL13O43927 109 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 AHSA1O95433 338 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 FUT4P22083 530 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 IDUAP35475 653 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 DIO1P49895 249 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 CARD18P57730 90 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 ACTR3P61158 418 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 SPIBQ01892 262 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 EGR4Q05215 589 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 SF3B4Q15427 424 aaKnown RBP eCLIP13.89□□□□□ -0.199e-16■■■■■ 52
RPRD1A-208ENST00000589050 C1QL3Q5VWW1 255 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 C5orf46Q6UWT4 87 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 C3P1Q6ZMU1 363 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 TMPPEQ6ZT21 453 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 PIK3C3Q8NEB9 887 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 TMEM255BQ8WV15 326 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 OSTF1Q92882 214 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 SLCO4A1Q96BD0 722 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 ZNF845Q96IR2 970 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 TRIB1Q96RU8 372 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 TMEM43Q9BTV4 400 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 POTEKPQ9BYX7 375 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 DENND2DQ9H6A0 471 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 YY1AP1Q9H869 796 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 TIGARQ9NQ88 270 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 MAN2C1Q9NTJ4 1040 aa13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 CCM2LQ9NUG4 571 aaPredicted RBP13.89□□□□□ -0.19
RPRD1A-208ENST00000589050 TRAV36DV7A0A075B6V5 113 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 CLCA1A8K7I4 914 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 KPNA4O00629 521 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 NPIPB7O75200 414 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 FKBP6O75344 327 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 PMS2P2O95744 297 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 STSP08842 583 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 IMPDH2P12268 514 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 ACVR2AP27037 513 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 RRM2P31350 389 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 PTGER4P35408 488 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 RBM34P42696 430 aaKnown RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 CA7P43166 264 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 RPS5P46782 204 aaKnown RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 OR2B6P58173 313 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 SMIM11AP58511 58 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 CSNK2A1P68400 391 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 EIF2S3LQ2VIR3 472 aaKnown RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 ACSF3Q4G176 576 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 FGD3Q5JSP0 725 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 C1orf185Q5T7R7 199 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 PPP4R4Q6NUP7 873 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 RPTNQ6XPR3 784 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 OR52J3Q8NH60 311 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 PRR7Q8TB68 274 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 TMEM239Q8WW34 195 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 KTI12Q96EK9 354 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 HS6ST2Q96MM7 605 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 EPYCQ99645 322 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 ZNF426Q9BUY5 554 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 SRXN1Q9BYN0 137 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 ANKRD19PQ9H560 264 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 PAQR5Q9NXK6 330 aaPredicted RBP13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 HEATR5AQ86XA9 2040 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 PCNX3Q9H6A9 2034 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 SPTA1P02549 2419 aa13.88□□□□□ -0.19
RPRD1A-208ENST00000589050 A0A1W2PRQ8 180 aa13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 KDM4EB2RXH2 506 aaPredicted RBP13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 PYCARD-AS1I3L0S3 204 aa13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 GADD45GO95257 159 aa13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 SYNGR4O95473 234 aa13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 HOXD4P09016 255 aaPredicted RBP13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 UGT2B15P54855 530 aa13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 SLC35A1P78382 337 aa13.87□□□□□ -0.19
RPRD1A-208ENST00000589050 DGCR6Q14129 220 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms