RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 BMP4P12644 408 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 APEHP13798 732 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 ALDH3A1P30838 453 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 RYKP34925 604 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 MAGEA8P43361 318 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 ATP6AP1LQ52LC2 224 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 FRRS1Q6ZNA5 592 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 IFT20Q8IY31 132 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 CNPY4Q8N129 248 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 NATD1Q8N6N6 113 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 MNS1Q8NEH6 495 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 ZNF563Q8TA94 476 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 EPS8L3Q8TE67 593 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 ZG16BQ96DA0 208 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 ZHX1-C8orf76Q96EF9 292 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 C1orf159Q96HA4 380 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 SLC35G5Q96KT7 338 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 FOXN4Q96NZ1 517 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 MECRQ9BV79 373 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 BPESC1Q9GZL8 116 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 OR51I1Q9H343 314 aa9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 SPIN1Q9Y657 262 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-206ENST00000571714 IGHV1-18A0A0C4DH31 117 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 ZC3H12DA2A288 527 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 SMIM23A6NLE4 172 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 DUXAA6NLW8 204 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 AP3D1O14617 1153 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 ANKRD28O15084 1053 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 NPHS1O60500 1241 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 SKAP2O75563 359 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 PGRP06401 933 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 GUSBP08236 651 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 G6PDP11413 515 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 ZNF23P17027 643 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 CCNA2P20248 432 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 PRPS1L1P21108 318 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 IL2RGP31785 369 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 CLK1P49759 484 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 OR2B6P58173 313 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 SLC17A1Q14916 467 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 CR1LQ2VPA4 569 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 OR4F3Q6IEY1 312 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 BHLHB9Q6PI77 547 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 ZCCHC23Q6ZST2 131 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 ZIC4Q8N9L1 334 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 FNDC5Q8NAU1 212 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 MIPOL1Q8TD10 442 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 RAB8BQ92930 207 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 SAP130Q9H0E3 1048 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 EXOSC3Q9NQT5 275 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 TMEM181Q9P2C4 612 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 MID2Q9UJV3 735 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 TRAPPC4Q9Y296 219 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 SLC35A3Q9Y2D2 325 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 SLC9A8Q9Y2E8 581 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 FKBP7Q9Y680 259 aa9.7□□□□□ -0.86
NPLOC4-206ENST00000571714 LOC390937A0A1W2PQ73 354 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 TMEM72A0PK05 275 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 LRP5LA4QPB2 252 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 KLF11O14901 512 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 SCN2BO60939 215 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 TGFAP01135 160 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 OR12D1P0DN82 309 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 HNF1AP20823 631 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 MPGP29372 298 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 IDH2P48735 452 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 SNRPD2P62316 118 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 ZSWIM7Q19AV6 140 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 TNFAIP8L2Q6P589 184 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 C16orf62Q7Z3J2 963 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 MEX3DQ86XN8 651 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 OIT3Q8WWZ8 545 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 TMEM45BQ96B21 275 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 ROPN1LQ96C74 230 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 BOD1Q96IK1 185 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 APOPT1Q96IL0 206 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 ZNF385AQ96PM9 386 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 PRPF18Q99633 342 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 SEC61A2Q9H9S3 476 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 CA10Q9NS85 328 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 MKS1Q9NXB0 559 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 SLC17A7Q9P2U7 560 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 UPB1Q9UBR1 384 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 ZDHHC2Q9UIJ5 367 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 OSGIN1Q9UJX0 560 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 WDR45Q9Y484 360 aa9.69□□□□□ -0.86
NPLOC4-206ENST00000571714 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.68□□□□□ -0.867e-20■■■■□ 19.6
NPLOC4-206ENST00000571714 ARFGEF3Q5TH69 2177 aa9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 TMED7-TICAM2A0A0A6YYA0 188 aa9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 RNASET2O00584 256 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 ZNF208O43345 1280 aa9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 WIPF1O43516 503 aa9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 EIF1BO60739 113 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 ITGA2P17301 1181 aa9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 CDH2P19022 906 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 FKBP2P26885 142 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 TACR3P29371 465 aa9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 SERPINF1P36955 418 aa9.68□□□□□ -0.86
NPLOC4-206ENST00000571714 CLDN8P56748 225 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms