RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PPP1R3DO95685 299 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ACP1P24666 158 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 IFITM2Q01629 132 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 C3orf38Q5JPI3 329 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 FAM209AQ5JX71 171 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 CPEB2Q7Z5Q1 589 aaKnown RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ATCAYQ86WG3 371 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 PROKR2Q8NFJ6 384 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 OR4F15Q8NGB8 312 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 RHBDD1Q8TEB9 315 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 SGTBQ96EQ0 304 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 TBL1XR1Q9BZK7 514 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 LAT2Q9GZY6 243 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 RNF167Q9H6Y7 350 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 FGF20Q9NP95 211 aaPredicted RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ABCB10Q9NRK6 738 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 CMC2Q9NRP2 79 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 PPIEQ9UNP9 301 aaKnown RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ASCC3Q8N3C0 2202 aaKnown RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 LOC100506127A0A0U1RQW1 187 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 TEX51A0A1B0GUA7 166 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 TMEM200CA6NKL6 621 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ELOA3DA6NLF2 546 aaPredicted RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 M0R3G1 203 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 MYL12BO14950 172 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 FADS1O60427 444 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 WISP1O95388 367 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 SCG5P05408 212 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 HTR1FP30939 366 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 SLC9A3P48764 834 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 CLK1P49759 484 aaKnown RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 TOMM34Q15785 309 aaPredicted RBP8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ELOA3BQ3SY89 546 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 GXYLT1Q4G148 440 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 C19orf48Q6RUI8 117 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 RTL4Q6ZR62 310 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ELOA3Q8NG57 546 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 OR5M3Q8NGP4 307 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 ZNF563Q8TA94 476 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 DYNC2LI1Q8TCX1 351 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 PTP4A1Q93096 173 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 NACC2Q96BF6 587 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 DEPDC7Q96QD5 511 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 R4GN57 208 aa8.59□□□□□ -1.03
LINC00838-201ENST00000562956 COL5A1P20908 1838 aaPredicted RBP8.58□□□□□ -1.04
LINC00838-201ENST00000562956 TRBV11-1A0A0K0K1C0 115 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 A0A1W2PQD3 144 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 WWP2O00308 870 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 CCRL2O00421 344 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 SCO2O43819 266 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 GP1BAP07359 652 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 ZNF883P0CG24 379 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 PNMTP11086 282 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 EVI2BP34910 448 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 MC2RQ01718 297 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 ZNF846Q147U1 533 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 OR2G6Q5TZ20 316 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 TMEM205Q6UW68 189 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 LPAR4Q99677 370 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 ARPC5LQ9BPX5 153 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 ULBP3Q9BZM4 244 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 H2AFY2Q9P0M6 372 aaPredicted RBP8.58□□□□□ -1.04
LINC00838-201ENST00000562956 NPFFR2Q9Y5X5 522 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 PMF1-BGLAPU3KQ54 211 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 FAM86C2PA6NEL3 165 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 OR6C70A6NIJ9 312 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 MCIDASD6RGH6 385 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 ADAM10O14672 748 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 DLGAP3O95886 979 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 LIMS3P0CW19 117 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 LIMS4P0CW20 117 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 MYL12AP19105 171 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 ITPKBP27987 946 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 TACR3P29371 465 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 NOS3P29474 1203 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 CD79BP40259 229 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 SLC1A3P43003 542 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 LIMK1P53667 647 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 NRG3P56975 720 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 FBXW4P57775 412 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 EGR4Q05215 589 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 TMEM44Q2T9K0 475 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 NIPAL3Q6P499 406 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 SIRT6Q8N6T7 355 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 ZHX1-C8orf76Q96EF9 292 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 VMP1Q96GC9 406 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 CHCHD6Q9BRQ6 235 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 SLC19A3Q9BZV2 496 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 FN3KQ9H479 309 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 HMG20AQ9NP66 347 aa8.58□□□□□ -1.04
LINC00838-201ENST00000562956 IRGMA1A4Y4 181 aa8.57□□□□□ -1.04
LINC00838-201ENST00000562956 PPM1BO75688 479 aa8.57□□□□□ -1.04
LINC00838-201ENST00000562956 OR7A10O76100 309 aa8.57□□□□□ -1.04
LINC00838-201ENST00000562956 NADKO95544 446 aaPredicted RBP8.57□□□□□ -1.04
LINC00838-201ENST00000562956 CLUP10909 449 aa8.57□□□□□ -1.04
LINC00838-201ENST00000562956 PEPDP12955 493 aa8.57□□□□□ -1.04
LINC00838-201ENST00000562956 SLC6A6P31641 620 aa8.57□□□□□ -1.04
LINC00838-201ENST00000562956 CRMP1Q14194 572 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms